Gene Vapar_6175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_6175 
Symbol 
ID7975065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand
Start bp908086 
End bp908406 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content59% 
IMG OID644796745 
ProductAntibiotic biosynthesis monooxygenase 
Protein accessionYP_002948004 
Protein GI239820819 
COG category[S] Function unknown 
COG ID[COG1359] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATCA TCGTCGCGGT CAAGTACAGG CTGCAGCCCG GCAAGCGGGA CGAGCTGCTG 
ACCTTCGTCT CGGAAAACGT CATCAATACC CGGTGCGAGC CGGGCAACCT GGAATACACT
CACTACCCGT CTCTCGAGGA CGAGCAGGAG ATGTTCGTCT TCGAGATGTG GGAAGACATG
AAGAATCTGG ATGAACACAT CCGCATGCCC CACTACGTCG CGTTTGCCGA CAGGCGCATG
CCGATGCTGG AGTCCTGGGA GGCCCGGATC TACGAGGCTC GTCTCCTGCG CGAGGTAAAG
AAGGCGCCTT TGTCGGACTG A
 
Protein sequence
MAIIVAVKYR LQPGKRDELL TFVSENVINT RCEPGNLEYT HYPSLEDEQE MFVFEMWEDM 
KNLDEHIRMP HYVAFADRRM PMLESWEARI YEARLLREVK KAPLSD