| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6150 |
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| Symbol | |
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| ID | 7975026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 874440 |
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| End bp | 875120 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644796705 |
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| Product | transcriptional regulator, Crp/Fnr family |
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| Protein accession | YP_002947979 |
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| Protein GI | 239820794 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCCCC TCAAGGATCT CCACGCCTTC TTCGAGCGCT GCATCTGGCC GCGCGCATTG
ACGCAGGCCG AGCGAACCAA GGCCTTCGAG GCCTTGTACA TCCGCCACCA TGAAGCGCAC
TCCTATGTGT GCCGGCGCGA CGAGACCGCC GACAGCTGGA TCGGCGTGCT CGAAGGTTTC
TTGCGCGTGC AGGACACCAC GGTGGACGGC CGCCTGATCA TGTTCACCGG GGTTGCGTCG
AGCGGGTGGA TCGGCGAGGG CTCGCTGCTG AAGCCCGAGC AGCGCAAGTA CGAGGTCATG
GCGACGCGGC CGACCGTCAC CGTGCATCTG CCGAGGGCCA CGTTCTCCTG GCTGCTCGAT
CGAAGCATTC CGTTCAACCA CTTCATGCTC TCCCATCTGA ACGAGCGGCT CGGGCAGTTC
ATCGCCATGG TCAAGTTCGA CCGGCTGCTC GAGCCGACGT CGCGCGTGGC GCGGGGAATC
TCCAGCCTCT TCCATCCGGT GCTCTATCCG AACACCGACT CCACGCTGCG GATCAACCAG
GAGGAGATCG GTTCGCTCGT CGGCATCTCG CGCCAGCGCG TCAACGCCGC GCTGACCGAA
CTGGAAAGCG CCGGCCTCAT CCGGCGGGGC TACGGCTACA TCACGGTGAT GGACCGGCAG
GCGCTTGCCA GGTATCCCTG A
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| Protein sequence | MLPLKDLHAF FERCIWPRAL TQAERTKAFE ALYIRHHEAH SYVCRRDETA DSWIGVLEGF
LRVQDTTVDG RLIMFTGVAS SGWIGEGSLL KPEQRKYEVM ATRPTVTVHL PRATFSWLLD
RSIPFNHFML SHLNERLGQF IAMVKFDRLL EPTSRVARGI SSLFHPVLYP NTDSTLRINQ
EEIGSLVGIS RQRVNAALTE LESAGLIRRG YGYITVMDRQ ALARYP
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