| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6147 |
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| Symbol | |
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| ID | 7975023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 869135 |
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| End bp | 871231 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644796702 |
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| Product | CoA-binding domain protein |
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| Protein accession | YP_002947976 |
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| Protein GI | 239820791 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1042] Acyl-CoA synthetase (NDP forming) |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.551757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAAC TGAACGCCAT CGCCAGGCTG CTCAAGCCGC GCAGCGTCGC CGTGATCGGC
GCCTCGGCCG ATGCGGCCAA GACGGCCGGC CGGCCCGTGG CCTACTTGCG CAAGCACGGA
TTCACGGGCG AGATCTATCC GGTCAATCCG CGTGCCGATG CCATCGGCGG CCTGGCCTGC
TATCCGGACA TCGCCTCGAT TCCCGGCACG CCCGATGTGG GCATCGTGCT GCTGGGCGCC
GAGCGCGCGC ACCAGGCCGT GCGCGAACTC GCGGCCAAGG GAACCGCCGC GGCAATCGTG
CTCGCCAGCG GCTACACCGA AACGGGGGAG GAGGGCGCGC GCCGCCAGCA GCAGCTCATC
GAGGCGGCCG GTGGCATGCG CATCCTCGGC CCCAACACGA TCGGGCTCGT CAACCTGAGC
GACAACATCG TGCTCTCCGC CAGCGGCGCG CTCGAGATGG AGCACTTTCC GGTCGGCGGG
ATCGGCGTGG TCTCGCAGAG CGGGGGCATC CTCGGTGCGC TGCTCTCGCG CGCGGCGGCG
CGCGGCATCG GCCTGTCGAA GCTGATCTCG ACCAGCAACG AAGTGGACCT GGACCTGGCG
GATTTCGTCG ACCACCTGGC CGACGATGCC GACACCAAGG TCATCGCCCT CTATGTGGAG
AGCGTGCGCA ACCCGGAGAA GTTTCGTGCC GCTGCGCTGA AGGCCGCGCG CGCCGGAAAG
CCGGTTGTCG CGTTCAAGAT CGGCCGCTCC GAAGCGGGCG CGAAGGCCGC CGTGTCGCAC
ACCGGTGCAC TGGCGGGCGC CGACCGCATG TACGACGCGC TGTTCAGGCA GGTCGGCGTG
ATCCGCGCGC AGACCTTCGG CGACCTGCTC GACATTCCCG TCGCGTTGGC CACGGGCCGC
AAGCTGCGCG GCAAGCGCGT GGCCATCCTG ACCTCGACCG GCGGCGCCGG AACGCTGGTG
TCGGACGACC TGGGCATGCA GGGCTTCGAG ACGCCGGCGC CGGATGCCGC AACGGCGCAG
GCCTTGCGCG CGCTGCAAAG CGGCGATCAC GCGGTGCTCG ACCGCAACCC CATCGACGTG
ACCCTGGCCG GCCTGCAGCC GGACCTGCTG CGCGGCGCCA TCGACATCCT GCTCGAGAGC
CCCAGCTACG ACGCGCTGGC GATCATCGTC GGCTCGTCCA GCCTGGCCAT GCCGGAGCTC
ATGGCCGGCG CCATCCAGGA CTGCCTGCCC CGCTCGGACA AGCCGGTGAT CGCCTACGTG
AGCCCGCATG CGCCCGAAGT CGCGGCGCTT CTCACGCAGC GCGGTGTGCC CGCCTTTGCC
GCGGCCGAAA GCTGCACCAG CGCGCTCGCC GCCATGCTGA ATGGCGGCCG CTGGCAGGAG
CCCAAGCCGT CCAGCGCGCC TGCCGCCGCC GTGCCCATCG ACGACCTGCC GGCCGGCTCC
CTCGATGAAG CGCAGGCCAA GCAGCTGTTC ACCCGCTTCG GCGTACCGTG CGCGCGCGAG
ATGGTGGTGG CCACGCCGGC CGAGGCCGAA GCCGCGGCGC GCGAACTGGG CGGCCGCGTC
GTGCTCAAGA TCCTGTCGGC CGAGATCACG CACAAGAGCG ATGTCGGCGG CGTCGCGGTG
AACCTGTCGG CCGAGACGGT GGGCGCGCGC CTGCAGGCGA TGGCCGCCGA AGTCGAGAGC
AAGGCCGGCG TGGGGCCCCG GCGCTTCCTG GTGCAGGAAA TGGTGGGCGG CGGCACCGAG
CTGATCCTGG GCATGCACCG CGACCCGCTG GGCACCGCCA TCCTGCTGGG CATGGGCGGC
ATCACTGCCG AACTATTAAA GGACACCACG ATGCGGCTGC TGCCGCTCCA GGGCGGCCTG
AGCCGCGAGG ATGCGCTCTC CATGGCGCGC GAGCTCAAGA CCTGGCCCTT GCTCGATGGC
TTCCGCGGCC GGCCCAAGGC CGATGTGAAG GCGCTGGTCG ATGCCATCGT CGCCTTCTCG
GACATGGCGG CGCGGCTCGG CGAGCGTTTG CTCGAAGCCG AGATCAACCC GGTCTTCGTG
CTGCCGGAAG GGCAGGGCGT GCGCGCGGCC GATGGCGTGG TCGTGCTGGC CGGTTGA
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| Protein sequence | MTELNAIARL LKPRSVAVIG ASADAAKTAG RPVAYLRKHG FTGEIYPVNP RADAIGGLAC
YPDIASIPGT PDVGIVLLGA ERAHQAVREL AAKGTAAAIV LASGYTETGE EGARRQQQLI
EAAGGMRILG PNTIGLVNLS DNIVLSASGA LEMEHFPVGG IGVVSQSGGI LGALLSRAAA
RGIGLSKLIS TSNEVDLDLA DFVDHLADDA DTKVIALYVE SVRNPEKFRA AALKAARAGK
PVVAFKIGRS EAGAKAAVSH TGALAGADRM YDALFRQVGV IRAQTFGDLL DIPVALATGR
KLRGKRVAIL TSTGGAGTLV SDDLGMQGFE TPAPDAATAQ ALRALQSGDH AVLDRNPIDV
TLAGLQPDLL RGAIDILLES PSYDALAIIV GSSSLAMPEL MAGAIQDCLP RSDKPVIAYV
SPHAPEVAAL LTQRGVPAFA AAESCTSALA AMLNGGRWQE PKPSSAPAAA VPIDDLPAGS
LDEAQAKQLF TRFGVPCARE MVVATPAEAE AAARELGGRV VLKILSAEIT HKSDVGGVAV
NLSAETVGAR LQAMAAEVES KAGVGPRRFL VQEMVGGGTE LILGMHRDPL GTAILLGMGG
ITAELLKDTT MRLLPLQGGL SREDALSMAR ELKTWPLLDG FRGRPKADVK ALVDAIVAFS
DMAARLGERL LEAEINPVFV LPEGQGVRAA DGVVVLAG
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