| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6118 |
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| Symbol | |
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| ID | 7975564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 838490 |
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| End bp | 839671 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644796674 |
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| Product | hypothetical protein |
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| Protein accession | YP_002947948 |
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| Protein GI | 239820763 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGA ATCCATGGGC AATGGGTGCG GTGGCCGTGG CCGTCGCAGC GGTGGTGGTG
GCATGCGGCG GGGGCGGCTC GGGTGGCGGC GGCTTTGCAG GTGGGCTTCC TGTCGGTGCG
GGTACTCCCG GCGCGGGTAC TCCAGGTGCT GGTGCTGGCA CCCCTGCTGG CGGCACGAGC
AGCCCCACCG GTACCGCACC GGTGGCAACC AATGACAGCG CCAGCGGCCA GGCCGGCGCC
AGCGTCACCA TCAACGTGCT CGACAACGAC CAGGATGCCG ACGGCAATCT CGACCGCAAT
TCGGTGCGCT TCGTGCAGCC GCCGGCCGGC GCCACCTTGT CCGCCGACGG GCGCAGCCTG
CAGGTGCCCA ACGAGGGCAG CTGGCAGGCT GGCAACGAGG GGGCAGTGGT CTTCACTCCC
GCGAGCGGCT TCACCGGCAG TCCGACCGTG GTCAGCTACA CCGTGTCCGA TGCCACCGGG
CTCACGTCCG CGGCCGCGAC GATCACGGTC ACCGTCGCGG TGGCATCGGC CACCAGTTCG
GCACCCTGCT TCAACGAGGG GTTCTTCCGG ACGGGAACGA TCATGGATCT CGAACACACC
GTCAGCGGGG ATGGCGCGAC GCCGCCTCGG CGCACGGTGA GGACCGTCAC GGGACCCAAG
GAGTTCAATG GCGCGGCGAC CGTGGAGACG AAGTACGATT TCTATGGGGA CGACGGCAGC
CATGCAGGGA CCAACATGGA CTACAACGCC ATTCAGGACG GCTTCCTGCT GTTCTACGGC
ATGACCAGCA GCAACGTCCG CCAGACGATG AGCCCGCCGA GTCGGCAGCC GATCGCCATG
GAGCCCGGAC AAACCTACGA GTTCACCTAC ACCGCCAAGA ACGAATACGC CGACCACGTC
GAAGAAAACA CGACGACGAA GTCCTACACC TACGTGGGCC GCGAGACCCT CCAGAGTGCT
GTGGGAACCT TCGCGGCCTG CAAGTTCACC TCGCATGGAG TGACCACTAT CACCACTCCT
ACGCCCATGA CACAGACCTT CGACCTGGTC TACTGGGTTG CCGCGGAGGG CCCGTATCGG
GGGTTTGCGC TGCGCACCGA GGCTGTGGGC CAGTACCCGA ATGCACCCAC GATCCATCAA
GTGGTACAGA CCACCAAGAT CAGCGTCTTC GACATCAAGT GA
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| Protein sequence | MKKNPWAMGA VAVAVAAVVV ACGGGGSGGG GFAGGLPVGA GTPGAGTPGA GAGTPAGGTS
SPTGTAPVAT NDSASGQAGA SVTINVLDND QDADGNLDRN SVRFVQPPAG ATLSADGRSL
QVPNEGSWQA GNEGAVVFTP ASGFTGSPTV VSYTVSDATG LTSAAATITV TVAVASATSS
APCFNEGFFR TGTIMDLEHT VSGDGATPPR RTVRTVTGPK EFNGAATVET KYDFYGDDGS
HAGTNMDYNA IQDGFLLFYG MTSSNVRQTM SPPSRQPIAM EPGQTYEFTY TAKNEYADHV
EENTTTKSYT YVGRETLQSA VGTFAACKFT SHGVTTITTP TPMTQTFDLV YWVAAEGPYR
GFALRTEAVG QYPNAPTIHQ VVQTTKISVF DIK
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