| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6113 |
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| Symbol | |
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| ID | 7975559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 833288 |
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| End bp | 834175 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644796669 |
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| Product | amidohydrolase 2 |
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| Protein accession | YP_002947943 |
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| Protein GI | 239820758 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGCTA GCACCGTGGA CAAGGACTGG CTGTGCTTTC ACCCGAACCC GTCGAAGCCG
CGCTTCTCGC CGCCGCCCGG CGCGGTGGAC GCCCACTGCC ACGTCTTCGG CCCGGCGGCC
ACGTTTCCCT ATGCGCCCGA GCGCAAGTAC ACGCCCTGCG ATGCTTCGAA GGATCAGCTC
TTTGCCCTGC GCGACCTGCT GGGCTTCGAG CGCAACGTGA TCGTGCAGGC CACCTGCCAC
GGCAGCGACA ACCGCGCGCT GCTCGATGCC ATCGCGGATT CGAACGGACG CGCGCGCGGC
GTGGCCTCGG TCGCGCCCAA CGTGAGCGAT GCCGAACTGC ACCGGCTGCA CGAGGCCGGC
ATCCGCGGCG TGCGCTTCAA CTTCCTCAGG CGCCTGGCGG ACTTCACGCC GCGCGAGGTG
CTGATGGACA TCGCCAAGCG CATCGCGCCG CTCGGCTGGC ACGTGGTCGT GTACTTCGAG
GCGCAGGACC TGCCCGAGCT CTGGGATTTC TTCACCCGCC TGCCGACGAC CGTGGTGGTC
GATCACATGG GCCGGCCCGA CGTGAGCCAG CCGGTCGACG GGCCGCAGTT CGAGCGCTTC
GTGCGGCTGA TGCGCGAGCA TCCGAACGTG TGGTCGAAGG TGAGCTGCCC CGAGCGCCTG
TCGGTCTCCG GATCGCCGGC CTACGATGAC GTCGTGCCGT TCGCGCAGCG CCTGGTCGAG
ACCTTCCCGG ACCGTGTGCT GTGGGGCACC GACTGGCCGC ATCCCAACCT CAAGACGCAC
ATGCCCGACG ACGGCACGCT GGTCGACATG ATTCCGCGCA TCGCGCGCAC CGCGCAGCTG
CAGCAGCAGC TGCTCGTGGA CAACCCGATG CGGCTCTACT GGGCCTGA
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| Protein sequence | MPASTVDKDW LCFHPNPSKP RFSPPPGAVD AHCHVFGPAA TFPYAPERKY TPCDASKDQL
FALRDLLGFE RNVIVQATCH GSDNRALLDA IADSNGRARG VASVAPNVSD AELHRLHEAG
IRGVRFNFLR RLADFTPREV LMDIAKRIAP LGWHVVVYFE AQDLPELWDF FTRLPTTVVV
DHMGRPDVSQ PVDGPQFERF VRLMREHPNV WSKVSCPERL SVSGSPAYDD VVPFAQRLVE
TFPDRVLWGT DWPHPNLKTH MPDDGTLVDM IPRIARTAQL QQQLLVDNPM RLYWA
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