| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6107 |
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| Symbol | |
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| ID | 7975553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 825630 |
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| End bp | 827003 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644796663 |
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| Product | putative replication protein |
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| Protein accession | YP_002947937 |
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| Protein GI | 239820752 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCGAAG AAGACAATTC ACAATCCCGG TCTCCGCCGC GGCAGCCGCC CACGGCGGAG
GAGCAGAGCG TTGCCAAGGC CAACGAAGCC ATCGCCATCC GCCCCAAGCG CGGCCGGCTC
ACCCTGCTGT CGCGGCGCAT CTACAACGCG CTGCTCTACC ATTCGCAGCG CCAGGGCGTG
GACGAGCCGG TCTACCGGCT GACCTTGAGC GAACTGATCG GCGACGCCCG CTTCAACTCC
AACAACACCG AGCTGCTCAA GTCGCACCTG CGCGACATGC AGGCCACGAC CATCGAGTGG
TCGACCAGCA GCAGCTCCCT GAAGCGCTGG GTGTCCTCGC AGCTCCTGGG CACGGTCACG
ATCGAGGAGC AGGGCAGGGG GCGCCCCTGC ATGGTGACCT GGCGCTATCC GGACGAGATC
AAGGAGCGGC TGGTCAAGCC GCACCAGTAC ACGCGTGTGC TGCTCGAGAT GAGCAGCCAG
ATGCGCAGCT ATTCCGCCGC GGTGCTGTAT GAGATCGGCG CGCGCTATCT GACCTCGCCG
GGGCGGCTGT CGATGCGCGA GGACGTGGTC TGGTGGGCCG CGGTGCTCAC GGGCCGCAGC
GACATCAAGG AGGTCGACTA CCGCTTCCTC AAGCGCGACG TCATCAGCAA GGCGCTGGCC
GAGATCGACG CGCTGTGCGA GGACTTCGGG CTCGAGCTGA TCGAGCACAA GCGCGGCCGC
AAGATCGAGG AGATCCAGTT CCGGGTCGTT CCCAAGGTGC AGCAGCGCCT GGGCGACATC
AGCGCGTCGA ACCGCAACGT CTTCGACCTG GCGTTGGTGG GCCGGCTGAT CGCGCTGGGC
CTGAAACAGG ACGAGGCGCA GGATCTCTAC GCCACCACCG ACGAAGGGCA GATCCGCGCC
ACGCTCGACC ATGTGGACCA GCGGCTGCGC AATGCCTCGA TGCCGGTGCT CAAGTCGCCG
GCTGCGTATT TCAAGGATGC GCTAAAGAAG GGCTACGCGG GCGTGACCGC GATGGAGCCG
GCGCCCAGCA GCGGCCCGGC ACCGGCCCTG GCGCCACCCG TGGCGGTGCT GTCGGAGGCC
GACCGCCTGC GGCGCATCCG CGAGCTCTGG GAGAACGACC GCATGGGACA GGCGCGCGCC
GTGTTCGCCG AGATGCCGCA GCCCATGCAG GCCGAGGTGC GCACGCGCTT CGAGGCCGAG
CGGCTCGACC AGGTGGCCGC CCCCATTGCG CGTGCCTGGC GGCGCGACGG CCCGGCGAGC
CGCGTGGCCG CGACCACCTT CTTCCGCTGG CTGGCGGAGG ACACTTGGCC CGAGGAGCCC
TCCGACCGCG TGCTGCTGGA CTTTGCGCTC CAGCGCGGCG TGGCCGGCAT CTAG
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| Protein sequence | MVEEDNSQSR SPPRQPPTAE EQSVAKANEA IAIRPKRGRL TLLSRRIYNA LLYHSQRQGV
DEPVYRLTLS ELIGDARFNS NNTELLKSHL RDMQATTIEW STSSSSLKRW VSSQLLGTVT
IEEQGRGRPC MVTWRYPDEI KERLVKPHQY TRVLLEMSSQ MRSYSAAVLY EIGARYLTSP
GRLSMREDVV WWAAVLTGRS DIKEVDYRFL KRDVISKALA EIDALCEDFG LELIEHKRGR
KIEEIQFRVV PKVQQRLGDI SASNRNVFDL ALVGRLIALG LKQDEAQDLY ATTDEGQIRA
TLDHVDQRLR NASMPVLKSP AAYFKDALKK GYAGVTAMEP APSSGPAPAL APPVAVLSEA
DRLRRIRELW ENDRMGQARA VFAEMPQPMQ AEVRTRFEAE RLDQVAAPIA RAWRRDGPAS
RVAATTFFRW LAEDTWPEEP SDRVLLDFAL QRGVAGI
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