Gene Vapar_6081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_6081 
Symbol 
ID7975527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand+ 
Start bp800765 
End bp801271 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content66% 
IMG OID644796637 
Producthypothetical protein 
Protein accessionYP_002947911 
Protein GI239820726 
COG category[S] Function unknown 
COG ID[COG4731] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAACA TCATGCGACA CAAGCAAAAC CCTGCCGGCA AGGCGCGCGC GCTTCCGCTC 
CTTTTCGCAC TCGCGTTCCA GGGCCTCGCC GCGGCCGCTG CGCTCACGGC GCTGCCGGCC 
CGGGCGGACG AGACATCGCC CGTTGGCCTG TGGAAGAACG TCGACGACGT CAGCGGCAAG 
CCGCGGGCGC TGATCCGCCT CACCGAATCG AACGGCGTCC TCCAGGGAAA GATCGAGAAG 
GTGTTCCCGG CGCCGAACGA AGACCCGAAC CCGACCTGTG AAAAGTGCGA AGGCGCCAAC 
AGGAACGCAC CGGTCGTCGG GCTGGTGATC CTCAGCGGCC TCGCCAAGGA AGGCGGCGAA 
TACGCCGGCG GCCAGATCCT CGACCCCGAC AACGGCAAGG TCTACCGCAG CACCGTGCGC 
CTGACCGACA ACGGCAAGAA GCTCAGCGTG CGCGGCTACA TCGGTGTGCC GATGCTGGGC 
CGTTCACAGA CCTGGATACG CCAGTAA
 
Protein sequence
MMNIMRHKQN PAGKARALPL LFALAFQGLA AAAALTALPA RADETSPVGL WKNVDDVSGK 
PRALIRLTES NGVLQGKIEK VFPAPNEDPN PTCEKCEGAN RNAPVVGLVI LSGLAKEGGE 
YAGGQILDPD NGKVYRSTVR LTDNGKKLSV RGYIGVPMLG RSQTWIRQ