| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6048 |
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| Symbol | |
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| ID | 7975333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 769902 |
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| End bp | 771248 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644796607 |
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| Product | amidohydrolase |
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| Protein accession | YP_002947881 |
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| Protein GI | 239820696 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0044] Dihydroorotase and related cyclic amidohydrolases |
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| TIGRFAM ID | [TIGR00857] dihydroorotase, multifunctional complex type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.235771 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCCG ACCTTGTGAT TAGAAACGCA CGTGTGGTGC GTCATGACGG AGAGTTCCAC
GGCGGGGTGG CCATCAAGGA CGGAAGGATC GTCCTCACGG GCGCCGACAG CGCCTTGCCG
AAGGGCCATC GCGAAATCAA TGCCGGCGGC CGCGTGCTGA TGCCGGGCGT AGTGGACCCG
CACTGCCACC TTGGCGTCAA GTATCCATAC GCGGAAGACA TGCGCACCGA GATGGCTGCA
GCGGCTTCGG GAGGAGTCAC AACCGCGCTG CTCTATATCC GCAATCTCAA GCCTTCGTAC
TTGCCGTTTT ACGAGGAGCG CAAGGCCATC GGCGAAGAAA ATTCGATCAT CGATTTCGGT
TTTCACTTCG GGATCCAGCG CGAGGAACAC ATCGCGGAAA TTCCCGAGAT CGTCGCCAAG
ACGGGCGTGC GCTCGTTCAA GTGCTACTTC GGCTACGAAC CCGACAACCC CATCGGCATC
GTGCCGGCAA CCGACGGATG GGTATACGCT GCCATGCGCA TCCTCGCGAA GATCCCGGGC
GGCGTGATCA ATGTCCACTG CGAGAACACC CAGATCGCCT CGTGGATGAA GAACGAGATC
AAGGCCACAG GTCGGCAGGA TCTTGCCGCC TATACCGAGT CGCGGCCAGC CTTCTGCGAG
GTCGAGACGA TCCGCCGGAT GATCTTCCTG GCCGAGCGCA CGGGCTGCTC GCTGCACCTC
GTCCACACTT CGGTGGGCAT GGGGCCGGTG CTGGCCGCCG AGGCGCAGGC ACGCGGCGTG
CACGTCACGG TCGAGACCTG CCAGCACTAC CTGACCCGGA CGGCCTATGA CAGCGACCTC
GACATGCGTG CCAAGATCTC TCCGCCACTG CGCGACAAGG AAGAGCAGGA CGGGCTCTGG
CGCGGCATCC TGAACGGCTC GGTCTACAGC CTGGGCACCG ACCATGTGCC GTTCCTGCCG
AAGAAGCTCG AGGATCTCTG GACCGAGTTG CCCGGCGTGG TGTCGTTTCC ATGGGAACTG
CCGTTGATGC TTCATTTCGG CGTGCATCAG CGTGGCCTGG CATTGTCGCG ACTGGTTCAG
CTGAACTCGG CAAATCCGGC ACGCCGCTTC GGTCTCTGGC CGCGCAAGGG CAATATCGAG
GTCGGTTTCG ACGCCGATCT TGTGCTGGTC GATCTCGACG AAGAACGCAC GGTACACCAC
ACGGGGAAGG GAACCTGCAT CTACGAAGGC TGGAAACTCA AGGGCTGGCC CGTGCTGACC
GTGTCTCGTG GCGCGGTGGT CTACGAGAAC GGCCAGGTCG ACGAGAGCCA CTTCGGTCGT
GGTCGTTGTC TGTCCGTGCC GGCCTAG
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| Protein sequence | MSADLVIRNA RVVRHDGEFH GGVAIKDGRI VLTGADSALP KGHREINAGG RVLMPGVVDP
HCHLGVKYPY AEDMRTEMAA AASGGVTTAL LYIRNLKPSY LPFYEERKAI GEENSIIDFG
FHFGIQREEH IAEIPEIVAK TGVRSFKCYF GYEPDNPIGI VPATDGWVYA AMRILAKIPG
GVINVHCENT QIASWMKNEI KATGRQDLAA YTESRPAFCE VETIRRMIFL AERTGCSLHL
VHTSVGMGPV LAAEAQARGV HVTVETCQHY LTRTAYDSDL DMRAKISPPL RDKEEQDGLW
RGILNGSVYS LGTDHVPFLP KKLEDLWTEL PGVVSFPWEL PLMLHFGVHQ RGLALSRLVQ
LNSANPARRF GLWPRKGNIE VGFDADLVLV DLDEERTVHH TGKGTCIYEG WKLKGWPVLT
VSRGAVVYEN GQVDESHFGR GRCLSVPA
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