| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6038 |
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| Symbol | |
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| ID | 7975323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 763063 |
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| End bp | 763962 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796598 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002947872 |
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| Protein GI | 239820687 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.928597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGTCG ACCTCGGGGA TCTGAACGCC TTCGTGGCGG TGGCGGGAGC CAAGGGCTTT
CGCGACGGCG CACGCCTGAG CGGCACGAGC GCATCGGCCC TGAGCGAGGC GGTGCGCCGG
CTGGAGACCG AGCTCGGCGT GCGGCTGCTC CACCGCACGA CGCGCAGCGT GCGGCCCACC
GAAGCCGGAG AACGCCTGCT CGAGCGGCTG AGGCCCGCGC TGGCTGAAGT CGGTGCGGCG
CTGGACGTGG TGAACGGCTT TCGCGACCGG CCCACCGGCA CGCTCAAGCT CAACGTGCCG
ATCAGCGCCG CGCGGCTCGT GCTGCCGTCG ATCGTGCCGG GTTTTCTTGC GGCCTATCCC
GACATCTCGC TCGAGGTGAT TGCCGAGGAT GGTTTTGTCG ATGTGCTGGC CGCCGGCTGC
GATGCCGGCA TCCGCTACGA CGAGCGGCTC GAGCAAGACA TGGTCGCGGT GCCGATCGGC
CCGCGGCTGC AGCGCTTCGC GGTCGCGGCC GCCCCGGCGT ATCTCGATCG GCACGGCCGT
CCGCAGCATC CGCGCGAGCT GCTCGGCCAT GCCTGCCTGC GCGGGCGCTT TGCCAGCGGG
TCGATGCCTC CATGGGAGTT CGAACGCGAC GGCGAAAGCC TGCGCATCGA CGTGACGGGG
CAGCTGATCG TGCGGATCGG CGCGGCGGCC GATCTCACGG TCGATGCGGC CATCGCCGGT
GCCGGCGTGG TCTACCTGTT CGAGGACTGG CTGCGGCCGC ATTTCGAAAG CGGCGCGCTC
GAGCCGATCC TGGAGCCCTG GTGGCTGCGC TTCCCGGGGC CGTTCCTCTA CTATCCGGGC
CGCCGGTTGC TGCCGGCGCC GCTGCGGGCG TTCGTGGATT TCATACGAAA TGGTTCGTGA
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| Protein sequence | MNVDLGDLNA FVAVAGAKGF RDGARLSGTS ASALSEAVRR LETELGVRLL HRTTRSVRPT
EAGERLLERL RPALAEVGAA LDVVNGFRDR PTGTLKLNVP ISAARLVLPS IVPGFLAAYP
DISLEVIAED GFVDVLAAGC DAGIRYDERL EQDMVAVPIG PRLQRFAVAA APAYLDRHGR
PQHPRELLGH ACLRGRFASG SMPPWEFERD GESLRIDVTG QLIVRIGAAA DLTVDAAIAG
AGVVYLFEDW LRPHFESGAL EPILEPWWLR FPGPFLYYPG RRLLPAPLRA FVDFIRNGS
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