Gene Vapar_6035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_6035 
Symbol 
ID7975320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand+ 
Start bp760748 
End bp761239 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content68% 
IMG OID644796595 
ProductGentamicin 3'-N-acetyltransferase 
Protein accessionYP_002947869 
Protein GI239820684 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.343494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCACGA CCCCCGCCAG CTACGAGGTT CGGCAGCTCT CGGCCGACGA CGGTCCGCTG 
ATGACCGAGC TTCTCGCGGT TTTCGGCAAA GCCTTCGACG AACCGGCCGC CTACGCCGCC 
AGCCGCCCTC GGCCTGCGTA CCTGCGGCAG TTGCTGGGCA GCGACTATTT CATCGCGCTG 
GCGGCGCGCG AGGGGTCGCA GGTCATCGGC GGCCTCGCGG CCTACGAGCT GAAAAAGTTC 
GAGCAGGAAC GCAGCGAGAT CTACATCTAC GACCTGGCCG TTGCCGCCGG GCACAGGCGC 
CGGGGCGTGG CGACCGCGTT GATCCGCGAG CTCCAGCGCA TCGGCGCCGA ACGCGGGGCC 
TATGTGATCT TCGTGCAGGC CGATCCGCCC GATGCGCCGG CCGTCGCGCT GTACACGAAG 
CTGGGCGTGC GCGAAGACGT GCTGCATTTC GACATTCCGG TGCCGCCGGT GCAACCCGTG 
CAGGCGTCCT GA
 
Protein sequence
MSTTPASYEV RQLSADDGPL MTELLAVFGK AFDEPAAYAA SRPRPAYLRQ LLGSDYFIAL 
AAREGSQVIG GLAAYELKKF EQERSEIYIY DLAVAAGHRR RGVATALIRE LQRIGAERGA 
YVIFVQADPP DAPAVALYTK LGVREDVLHF DIPVPPVQPV QAS