| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6033 |
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| Symbol | |
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| ID | 7975318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 757631 |
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| End bp | 758551 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644796593 |
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| Product | dihydrodipicolinate synthetase |
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| Protein accession | YP_002947867 |
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| Protein GI | 239820682 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.356082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGAGC GTCCTTCATT GACAGGTGTC TTCCCTGTTC TTCCCACGCC CTTCGATGCC
CAGGGGCGGC CCGACGCGGA TTCGCTGCGC AGGCTGGCCG AATATCTGAT CCGGTGCGGC
GTCGATGGCA TGACCTACCC GGGTGTCGCC AGCGAGGTGG GCCAGCTGAC CCCCGACGAA
CGGCAATCGC TGCTGGGCGT CGTGCTGGCC GAGGTGGCTG GCCGCGTTCC GGTGATCGCG
GGCGTTTCGA GCGGCGACAC CGCGACGACC GTTCGCCTCG CGGCGGAGGC AAGCGCACGC
GGCGCGGCCG CGTTGATGGT GGCGGTGCCG CCGGACCGCA AAGGCGCGGC CGAGCAGATC
GCCTATTTCA GCGAGGTCGC GCGGGCCGCC GAGGGGACTG CGCTGATGCT GCAGAACGTG
CCGCCGCCGG TAGGTGCGGG GCTGGACCCC GAGGTGGTGC TCGAAATCCT CGCGGCGGTT
CCGTCGATCC GGTATGTCAA GGAGGAAACG CTGCCGAGCG GGCAGCGCCT TTCGGTGCTG
CGCGACAAGG CGCCGGCCAG CCTGCTGGGC GTCTTCGGCG GCGCGGGCGG GCGCTACATC
ACCGACGAAC TGCGCCGCGG CGCGGCCGGC ACCATGCCCG CGATCGAGCT GGCGGAGGTG
CACACCACGC TCTTCAAGGC GCACCGCGCG GGCGACGCCG ACCGGGTCCG CGCGCTCTTC
ACGCGCATGC TGCCGGTGCT GAACGTGCAG GCGGTGTTCC GCTGGTCGCT GACGAAGTAC
GTGCTCAAGA AGCGCGGCCT CATCGCCGAC ACGCGCCAGC GCATGCCGGG CCCGCTGCTC
GACGCGCAGG ACATGGCGGA TGTCGACGCC TTCCTGGCGG ACATCGCGGA CCTGCTGCTG
CCGCAGGACC GGCTGCCATG A
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| Protein sequence | MAERPSLTGV FPVLPTPFDA QGRPDADSLR RLAEYLIRCG VDGMTYPGVA SEVGQLTPDE
RQSLLGVVLA EVAGRVPVIA GVSSGDTATT VRLAAEASAR GAAALMVAVP PDRKGAAEQI
AYFSEVARAA EGTALMLQNV PPPVGAGLDP EVVLEILAAV PSIRYVKEET LPSGQRLSVL
RDKAPASLLG VFGGAGGRYI TDELRRGAAG TMPAIELAEV HTTLFKAHRA GDADRVRALF
TRMLPVLNVQ AVFRWSLTKY VLKKRGLIAD TRQRMPGPLL DAQDMADVDA FLADIADLLL
PQDRLP
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