| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6032 |
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| Symbol | |
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| ID | 7975317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 756447 |
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| End bp | 757634 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644796592 |
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| Product | Mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_002947866 |
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| Protein GI | 239820681 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.159313 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGGCT TCGCGAAGAT CGCGCAGGTC GAGAGCTTCA TCGTCTCGCT GCCGCGCGAC
ACGCCCTACC TCGGACCCCT GGGGCCCGGC GAGAAGATCA ACGAGCGCGG CTACCTCGTG
CGCAGCGGCA ATCGCGCGAT CTATCCGTCG ACCGACATGT CGGTGCTGAT CAGGATCACC
GCCGACGACG GCACCGTCGG CTGGGGCGAG ACCTACGGCA TCGTCGCGCC CGACGCGGTC
ACGAGCATCA TCGACGACGT GATCGGGCCG GTGATCGTGG GCCGCGATCC GCGCGACGCG
GTGGTGATCC AGGAAGACCT CTACGACCTG ATGCGCGTGC GCGGCTTCTT CGGGGGCTTC
TACGTCGATG CCATCGCGGG TGTCGACATC GCGGTGTGGG ACCTCTTCGG AAAGCTGGTG
GGCCAGCCCG TGGTCAAGCT GCTCGGCGGC CAGCGGCTCC AGACCGTGCC GGCCTACGTG
TCCGGCCTTC CGGGCGCGAC CCTCGCGGCC CGGCTCGAGC TCGCGCGCGG CTTCGTCGCC
AAGGGCTTCG ATGCCTTCAA GTACCACGCG GCCGTTTCCT TCGATGGCAT CGTGGCCGAG
ATGCGGACGC TGCGCGAAGG CCTGGGCGAC GGCGTCAGGC TGATGGTCGA CCTGCACTGG
AAGTTCACCG CGCAGGAAGC GGTGCAGCTC ATCGACCAGC TCGCGCCCTA CAGGCCCTAC
TTCGTCGAGG CCCCCTGCCA GCCCGAGGAC ATCGAGGGCC AGGCCCATGT GGGCGCGAGC
GTGCGCGTGC CGCTCGCGCT GGGGGAGGAG TGGCGCACGG TCTTCGAATA CCGCCCTCGC
CTGGAGCGGC GCGCAATGTC GATCGTGCAG CCCGAGATGG GGCACACCGG CATCAGCCAG
TTCATGCAGA TCGGCCGCAT GGCCCATGCG TTCCACATGA AGGTGATCCC GCACGCCAGC
ATCGGCCTGG GCATCTACCA GGCCGCGAGC CTGCACGCCA CGGCCGCGCT GCCCAATGCG
CCGATGCACG AATACCAGCA CTCGGTCTTC GACCGCAACC TGAAGTACGT GCGGACTGCG
ATGCGCTGCG ACGCCGGGGC CTTCCATCTG CCCGAGGGCC CGGGCCTGGG CATCGAGCCC
GCCCCGGAAG TCTGGCAGTT CCTCAGAAAG AAAGGCGCTG CGCAATGA
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| Protein sequence | MTGFAKIAQV ESFIVSLPRD TPYLGPLGPG EKINERGYLV RSGNRAIYPS TDMSVLIRIT
ADDGTVGWGE TYGIVAPDAV TSIIDDVIGP VIVGRDPRDA VVIQEDLYDL MRVRGFFGGF
YVDAIAGVDI AVWDLFGKLV GQPVVKLLGG QRLQTVPAYV SGLPGATLAA RLELARGFVA
KGFDAFKYHA AVSFDGIVAE MRTLREGLGD GVRLMVDLHW KFTAQEAVQL IDQLAPYRPY
FVEAPCQPED IEGQAHVGAS VRVPLALGEE WRTVFEYRPR LERRAMSIVQ PEMGHTGISQ
FMQIGRMAHA FHMKVIPHAS IGLGIYQAAS LHATAALPNA PMHEYQHSVF DRNLKYVRTA
MRCDAGAFHL PEGPGLGIEP APEVWQFLRK KGAAQ
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