| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6015 |
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| Symbol | |
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| ID | 7975300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 738429 |
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| End bp | 740816 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644796576 |
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| Product | DNA polymerase II |
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| Protein accession | YP_002947850 |
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| Protein GI | 239820665 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACATCCA CCGACCTCCA GGGCTTCATC CTCACGCGCC ACTGGCGCGA CGCGTCCGCC
GGCACGGAGA TCGAGTACTG GCTGGCCACC GACGCGGGGC CGAGGAAAGT GGTGCTGACC
TCCCGGCGCA GCGTCGCCTT CGTCGCCGCC CGGCACCGCG CGGCGGTCGA AGCCCACCTC
GCGGCCATGC CGGGCATGCA GCTGCGCGAA CTTGCCCTCA AGACCTTCCA GCAGGAAGCG
GTCCTCGGTG TCTATGCGAC GCACTTCCGC CAGCTCGGCC GGTTGGCACG CGCCCTCCAG
GCGCAGGACA TTCCCCTGCT CGAAGCCGAC GTGCGCCCGC ACGACCGCTA CCTGATGGAA
CGCTTCATCA CCGCCGGCGT GCGGGTGGAA GGTGGGCGGG CGGAGCGCGC GACCATCGTC
GACTGCAAAC TCAAGCCCGC GCCCGAATTC CGGCCGGTGC TGAAGCTCGT GTCGCTGGAC
ATCGAGACGA GCCAGCACGA AGCGCTCTAT TCCATTGCGC TGGACGGCAC GCCGGAGCGC
GTCGTCTTCA TGCTCGGCGA GCCGCCATCG GACCTGCCCC CTGAATCGAG CGAGCCCATG
GCCTTCTCGC TCGTCTATTG CCCGTCGCGC CGGGCCATGC TCGAGCAGCT CAACGACTGG
TTCGAGCGCA ACGACCCCGA CGTCATCATC GGCTGGAACG TCATCCAGTT CGACCTGCGC
GTGCTGCAGA AGACAGCCGA CGAGTGCGGC GTGCAGCTCC TCCTCGGGCG GGAGCGCCGT
CCCATCGAAT GGCGCACCCA TCCGGGCAAG CAGGGCTACC TGTTCGCGCC CACGCCGGGC
CGGGTCGTCA TCGACGGCAT TGACGCACTC AAGGCCGCGG TGTGGAGCTT CCCGTCCTTC
AGCCTCGAGA CCGTCTCGCA GGCGCTGCTC GGCGAAGGCA AGGCCATCGG CGACGAGTAC
GACAAGATGG CCGAGATCGA GCGGCGCTAC CAGCAAGACA AGCCCGCGCT CGCGCTCTAC
AACATCCGGG ACTGCGAGCT GGTCCTGCGC ATCTTCGACA AGGCCAAGCT GCTGCAGTTC
GTGATGGAAC GGGCCCAGAC CACGGGCCTG CAGGCCGACC ACTTCGGCGG CTCCATTGCC
GCGTTCAGCC ACCACTACAT GCCGCGGATG CATCGCCTGG GCTACGTGGC GCCGAATGTG
GGCGAGATCC CGAGCAAGGC CTATCCCGGC GGTTACGTGA TGGATTCGAA GCCGGGCTTC
TACGACTCCG TCGTGGTGCT GGACTACAAG AGCCTCTACC CTTCGATCAT CCGGACCTTC
CTGGTCGATC CGGTGGGCCT CGTCGAGGGC TCGAACGCCA GCGAACAACC GGCCGCGCGC
GTCCAGGGAC CCCAGGGAAC TGTCTTTTCG CGCGACCGGC ACTGCCTGCC CGAAATCGTG
ACCACGCTCT GGCGCGCCCG GGACGAGGCC AAGCGGGCGA AGAACGAGCC GCTGTCGCAA
GCGCTGAAGC TGCTCATGAA CTCCTTCGCC GGCGTGCTGG GCGCGGCCGA GTGCCGGTTC
TTCAACCCCA AGCTGGTCTC CGCCGTGACC CTTCGCGGGC ACGAGATGAT GAAGCTCACG
CGCGAATTCG TGGAGCAGCG GGGCTACGAG GCCATCTATG GCGATACCGA CTCCATCTTC
GTCTGGCTCA AGCGCACCCA CGGCAACGAA GAGGCGCACG CCGTCGCGGC CAGCCTGGCC
GCCGACATCA ATGCCTGGTG GACCCGCACG ATGCGGGAGG AGCAGGGCCT GGAGAGCTTT
CTCGAGATCG AGGTCGACAC CCACTACAAG AAGTTCTTCA TGCCCACCAT CCGCGGCTCG
GAGGTCGGCA GCAAGAAGCG CTACGCCGGC CTCAGTGCAG ATGCCGCGGG CAAGGAGGAG
ATGGTGTACC GCGGCCTGGA GATGGCGCGC AGCGACTGGA CCCCGCTCGC GCGGCAGTTC
CAGCAGGGCC TGCTGTCACG CATCTTCCAG GGCGAGCCCT ACAAGGAGTT CGTGACCGAC
TATGCGAGGT CGACGCTGGC GGGCGCCAAG GACGACCTGC TCATCTACCG CAAGCGCCTG
CGCCATCGGC TCGACGCCTA CCTGGTCAAC GTGCCGCCGC AGGTCCGCGC CGCGCGCATC
GCGGACGAAC ACAACGCCCG CATCGGTCGG CCCAGGCAGT ATCAGAAAGG CGGCTGGATC
CAGTACGTCA TGACGCAGAA CGGGCCGGAG CCGCTGGAAA CCCGCCATTC GCGCATCGAC
TACGAGCACT ACCTCACACG GCAGCTCCAG CCGATCGCCG ACGCCATTCT TCAGCCCATC
GGAGAGAGCT TCATGGCCTT GACGACTTCG CAGCGCGGGC TCTTCTAG
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| Protein sequence | MTSTDLQGFI LTRHWRDASA GTEIEYWLAT DAGPRKVVLT SRRSVAFVAA RHRAAVEAHL
AAMPGMQLRE LALKTFQQEA VLGVYATHFR QLGRLARALQ AQDIPLLEAD VRPHDRYLME
RFITAGVRVE GGRAERATIV DCKLKPAPEF RPVLKLVSLD IETSQHEALY SIALDGTPER
VVFMLGEPPS DLPPESSEPM AFSLVYCPSR RAMLEQLNDW FERNDPDVII GWNVIQFDLR
VLQKTADECG VQLLLGRERR PIEWRTHPGK QGYLFAPTPG RVVIDGIDAL KAAVWSFPSF
SLETVSQALL GEGKAIGDEY DKMAEIERRY QQDKPALALY NIRDCELVLR IFDKAKLLQF
VMERAQTTGL QADHFGGSIA AFSHHYMPRM HRLGYVAPNV GEIPSKAYPG GYVMDSKPGF
YDSVVVLDYK SLYPSIIRTF LVDPVGLVEG SNASEQPAAR VQGPQGTVFS RDRHCLPEIV
TTLWRARDEA KRAKNEPLSQ ALKLLMNSFA GVLGAAECRF FNPKLVSAVT LRGHEMMKLT
REFVEQRGYE AIYGDTDSIF VWLKRTHGNE EAHAVAASLA ADINAWWTRT MREEQGLESF
LEIEVDTHYK KFFMPTIRGS EVGSKKRYAG LSADAAGKEE MVYRGLEMAR SDWTPLARQF
QQGLLSRIFQ GEPYKEFVTD YARSTLAGAK DDLLIYRKRL RHRLDAYLVN VPPQVRAARI
ADEHNARIGR PRQYQKGGWI QYVMTQNGPE PLETRHSRID YEHYLTRQLQ PIADAILQPI
GESFMALTTS QRGLF
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