| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6011 |
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| Symbol | |
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| ID | 7975296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 734997 |
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| End bp | 736118 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644796572 |
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| Product | peptidase S58 DmpA |
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| Protein accession | YP_002947846 |
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| Protein GI | 239820661 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3191] L-aminopeptidase/D-esterase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCCCCTC CCACCGCACA GACGAGAGCG AGAGATCTGG GCTTGCGCTT CCCTGGCAAG
ACCGGCCCCG CCAACGCCAT CACGGACATC CCGGGCGTCG AAGTCGGGCA GACGACGCTC
ATCCATGGGG ACGGCGCGCT GCATGTTGGT GCGGGGCCCG TGCGCACCGG CGTGACGATC
GTCCTGCCGC GAGGCCGCTC AGGCGTGCTG CAGCCGGTCA AGTCCGGTGT GTATGCCCTC
AACGGCAATG GAGAGATGAC CGGGACGCAC TGGATCGAAG AGGCCGGCAT CTTTCGAGGC
CCCATCGGGC TCACGAACAC GCACAGCATC GGCATGGTCC ATCACGCGCT GGTGCGATGG
CTCACCCGGG TCGATGGCGA CCGCGGTGCC TACCCGTGGC TGATGCCGGT GGTCGCGGAG
ACCTGCGATG CCATGCTCAA CGACATGGAC GGGTTGCACG TGGAGGAATC CCACGTCCTG
GAGGCCATCG CCGCTGCAGC GCCCGGTGCC GTCGCCGAAG GCAGCGTCGG CGGCGGCACC
GGCATGGTCT GCTATGGCTT CAAGGGCGGA ACGGGCACGG CATCGCGCAT CGTGGGCGTG
GCGGGCCAGG ACTACCGCGT GGGCGTGCTG GTCCAGGCCA ACATGGGCAT CCGCCCATGG
CTGAGCGTTC TGGGCGTGCC GGTCGGCGAA TGCATGCCGG GCCCGGGCGG CCAACACAAC
GAGCCGGCCG CGCGCGAGCA AGGCTCGATC ATCGTCGTCG TGGCGACCGA TGCACCGCTT
CTGTCCAGCC AACTCAAGCG GCTTGCACGG CGTGCCGCGC TTGGCGTGGG CAGAACCGGC
ACGCCGGGGG GGGACGGCTC GGGCGACATC ATGCTGGCAT TCAGCACCCA CTCGGACCAG
GCGCCCGGCG ATCATGGCGT CTGCCGGACC GAGTACCTGG CCCAGCACAC GCTCGATCCG
CTCTTCCTGG GCGTGGTGGA AGCCGTGGAG GAAAGCATCC TGAACGCGCT GGTTGCCGCC
CGGACCATGG TGGGGCGAAA CAACACGCGC GTGGAGGCGC TGGATCACAG TATGCTGGTC
GACCTGATGC GGCGCCATGG CCGCCTCGCC GAGACCCGAT GA
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| Protein sequence | MPPPTAQTRA RDLGLRFPGK TGPANAITDI PGVEVGQTTL IHGDGALHVG AGPVRTGVTI
VLPRGRSGVL QPVKSGVYAL NGNGEMTGTH WIEEAGIFRG PIGLTNTHSI GMVHHALVRW
LTRVDGDRGA YPWLMPVVAE TCDAMLNDMD GLHVEESHVL EAIAAAAPGA VAEGSVGGGT
GMVCYGFKGG TGTASRIVGV AGQDYRVGVL VQANMGIRPW LSVLGVPVGE CMPGPGGQHN
EPAAREQGSI IVVVATDAPL LSSQLKRLAR RAALGVGRTG TPGGDGSGDI MLAFSTHSDQ
APGDHGVCRT EYLAQHTLDP LFLGVVEAVE ESILNALVAA RTMVGRNNTR VEALDHSMLV
DLMRRHGRLA ETR
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