| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6005 |
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| Symbol | |
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| ID | 7975290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 728726 |
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| End bp | 729718 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796566 |
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| Product | peptidase S58, DmpA |
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| Protein accession | YP_002947840 |
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| Protein GI | 239820655 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3191] L-aminopeptidase/D-esterase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAGA ACGATGTGAA TGCCAGGCAA GGCCTGGTCC CGCGGCTGTG GCACGGTCCG
TCGGACGGCC GAACGCTGTC CTTTGACTTT CCCCAACTGA GGATCGGCAT TGCGGAGTAC
GAGGAGGGGC CCACCGGTTG CACGGTCCTT CATGTCAAGG GCGGCGCCGA CTGCGAGGTC
GACGTGCGCG GCGGCGCGCC GGGCCTCCTT GGCGGCTACC CGCGCGTGGA TGCGGTCAGC
CTTGCGGGCG GCTCCCTGTA CGGGCTGGAG GCGGCCACCG GCGTGGCATC GAGCATGCTG
GCCGAGCGCG GCGGTGCCGT GGGCTGGGGA AAGATCGCGC TGGTCTCCGG CGCCATCATC
TATGACTTCG GCGGGCGCAC CAATTCGATC TATCCGGACA AGGCGCTCGG CGCGGCAGCC
TACCGGTCGG CGCAGGCAGG GGCATTTCCG CAGGGCGCGC GCGGCGCGGG GCGCTCGGCC
GCGGTGGGCA AGTTCGCGGC CTATCCGGAC TACGAGCGCG AGCCCGGCGG ACAGGGCGCC
GCCTTCGCGA TGATCGGCGG AACGCGCGTT TTCATTGCCA CCGTGGTCAA TGCGCTGGGC
GTGATCGTCG ACCGCCAAGG TCGAGTGGTG CGCGGCCTGC GTCATCGGCG CACGGGCGTG
CGCCATCATC CGCGCGAGGT GCTTGTGCCC ACCGCCCCGG CCGCAGCCGG CGCGCCCGCC
GAACCGGTGG GCACCGTTGC CACCACCGAG AACACCACGC TCACCGTGCT CGTGATCGAC
CAGCCCATGC CCTCGTTGCT GCTGCGGCAA CTCGGCAGGC AGGTCCACTC CTCGATGGCT
CGCGCCATCC AGCCGTTCCA CACGCCGCAC GACGGCGACA TCCTCTTTGC GCTCTCCACG
GGAACAGGAA CTGCAACGGT CGACCCTTTC GTGCTTGCCG AAGCCGCATC GGACCTTGCG
TGGGATGCGG TTCTTCAGGC GGTGGACGCC TGA
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| Protein sequence | MMKNDVNARQ GLVPRLWHGP SDGRTLSFDF PQLRIGIAEY EEGPTGCTVL HVKGGADCEV
DVRGGAPGLL GGYPRVDAVS LAGGSLYGLE AATGVASSML AERGGAVGWG KIALVSGAII
YDFGGRTNSI YPDKALGAAA YRSAQAGAFP QGARGAGRSA AVGKFAAYPD YEREPGGQGA
AFAMIGGTRV FIATVVNALG VIVDRQGRVV RGLRHRRTGV RHHPREVLVP TAPAAAGAPA
EPVGTVATTE NTTLTVLVID QPMPSLLLRQ LGRQVHSSMA RAIQPFHTPH DGDILFALST
GTGTATVDPF VLAEAASDLA WDAVLQAVDA
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