Gene Vapar_5999 details

Gene Information

• Locus tag: Vapar_5999
• ID: 7975284
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012792
• Strand: +
• Start bp: 722883
• End bp: 723434
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 644796561
• Product: hypothetical protein
• Protein accession: YP_002947835
• Protein GI: 239820650

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACACGT TTTTCAATCC CAAGGCTTCG ATCCTCGTTG TTCTCATGCT GGTGCTGCCA 
ATGGCACAGG CAGCGACCAT GACCAAGGCC GAGTACCGGG CCGGCAAGAC CCGCATCAGC 
GCGGACGTCA AGGTCGGCAA GGCGGCGTGC GCCCCCTTGG CCGGCAACGC CAAGGACATC 
TGCATCGAAG AAGCAAAGGG CAAGGAGAAA GTTGCACGCG CAGAACTGGA GTACGGCTAT 
ACCGCCAAGT CCAGCGACCA GAACAAGATG CTGGTTGTGA AGGCAGAGGC GGCCTATGCA 
GTCGCCAGGG AAAAGTGCGA TGACCAGTCG GGCAATGCCA AGGACGTGTG CGTCCAGGAG 
GCCAAGGCTC TCAAGTCCAA GGCGCTGGCC AACGCCAAAA TGGGCAAGGA GATCGGCGAG 
GCCAAAGTCG ATGCCAGCCA GGCGAAGCGG GATGCCGACT ACAAGGTCGC TACCGAGAAG 
TGCGACAGCA TGTCGGGTGA CGCCAAGGCA AGTTGCATGG CCGCTGCCAG GACAAAGTTA 
GGGAAGATCT GA 

 

Protein sequence

MNTFFNPKAS ILVVLMLVLP MAQAATMTKA EYRAGKTRIS ADVKVGKAAC APLAGNAKDI 
CIEEAKGKEK VARAELEYGY TAKSSDQNKM LVVKAEAAYA VAREKCDDQS GNAKDVCVQE 
AKALKSKALA NAKMGKEIGE AKVDASQAKR DADYKVATEK CDSMSGDAKA SCMAAARTKL 
GKI