| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5975 |
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| Symbol | |
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| ID | 7975014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 702378 |
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| End bp | 703235 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644796538 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_002947812 |
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| Protein GI | 239820627 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.599678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCCTTC AACAGATCCT CAACGGTCTG ACGCTCGGCA GCGTTTATTG CCTGGTGGCC
TTGGGTCTGA CGCTGGTGTA CGGGATCCTG CAGGTGCCCA ATTTCGCGCA CGGTGCGTTC
TACATGGCCG GAGCCTTCGT GGCCTTCCAG CTCATGTCGG CGCTCAGCTG GAACTACTGG
CTCGCCATGT TGGCGGCCGC CGCGAGCGTG GCAGCCCTGG CAGCGCTTGC CGGCCGTTGG
GTGTTCCATC CGCTGCGCAA GTCGTCGGGC CTGCATCCGA TGATTGCGGC CATCGGGCTG
CTGCTATTCC TCGAGGCCTC TGCCCAGGCG ATCTGGGGTG CCGACTTCCG TCGCATGCCC
ACCCCCTACA CGGGCATGGT GGAGGTCGCC GGCATCGGCA TTGGGCAGCA ACGCGTGCTG
CTCGTCGCAG GTGCCTTCGT GCTGGTGGCG GCACTGCAGC TGTTCCTCAA GCGCACGGTC
GTTGGCGCCA CGATCGTCGC GCTGGCACAG AACCGCGAGG GTGCCGCGCT CATGGGCATC
GACACCCACC GCGTCGCAAT GCTCACCTTT GCCATTTCCG GCGCGCTTGC AGCTGCGGCG
GCGGTGCTCT ACGCGCCGAT CAATCTGGTG TACCCCGCCA TGGGCAGCCT GGTGATCACC
AAGGCCTTCG CGATCATCGT GATCGGCGGC ATGGGCAGCG TGCCCGGCGC CATCGCAGGC
GGGCTGATCA TCGGCTTTGC GGAGAGTTTC GGCGCCTTCT ATGTTTCGTC CGATGCCAAG
GACCTCATCG CCTTCGTGCT GTTGGTGGTG ATCCTGTCTG TGCGGCCGCA GGGCCTGTTC
ACGCGCGGGG TGCTTTGA
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| Protein sequence | MFLQQILNGL TLGSVYCLVA LGLTLVYGIL QVPNFAHGAF YMAGAFVAFQ LMSALSWNYW
LAMLAAAASV AALAALAGRW VFHPLRKSSG LHPMIAAIGL LLFLEASAQA IWGADFRRMP
TPYTGMVEVA GIGIGQQRVL LVAGAFVLVA ALQLFLKRTV VGATIVALAQ NREGAALMGI
DTHRVAMLTF AISGALAAAA AVLYAPINLV YPAMGSLVIT KAFAIIVIGG MGSVPGAIAG
GLIIGFAESF GAFYVSSDAK DLIAFVLLVV ILSVRPQGLF TRGVL
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