| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5974 |
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| Symbol | |
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| ID | 7975013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 701351 |
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| End bp | 702376 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644796537 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_002947811 |
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| Protein GI | 239820626 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCAC GTACCGGCTG GGGCCTGTTG CTGCTGCTGG GCCTCGTCTT CCCCCTCCTG
ACGGACAACG ACTACCACCT GACGGTGATG AGCAGCGCCT ACATCTTCGC GTTGGCGACC
CTGGGCCTGA ATCTCATCAC GGGCTATACG GGCCAATTCA ATCTCGCGCA TGCGGGCTTC
ATGGCGATCG GGGCCTACAC CGTGGGAATC CTCACGGTGG ACCACCAGTG GCCGTTTTGG
GCCGCGTTCT GCCTGTCGGG CCTGGTGCCT GTGGTGCTGG GCTTGCCCAT CGGGCTCCTG
TCGCTGCGCC TGAAGGGGCA CTTCTTCGCC ATCTTCACGA TGTGCATGGG CTACATCCTG
TTCCTCGGCA TCGAGAAATG GGAAAGCCTG ACGCACGGGG CGGTCGGCAT CATCGGCATT
CCCGTGCCGG AGGCACTCCC CACGCCGTTC GGCGATGTCT CCTTTGATTC GCCGCGCGCG
CTGTACTACC TGGTGCTGGG TTTTCTCACT CTGGGACTGT GGGTCATGCA CCGCATCGTC
GGTTCGCTGC TGGGACGCAC CTTCGTGGCC ATCCGCAACG GCGACGACCT GGCCGAGTCG
CTGGGCATCA ACCTGATGCG CAACAAGCTT CTGGCCTTTT TGCTGTCGGT GTTCTATGCG
GGCACGGCAG GTGGCCTGTA TGCGGGCTTC GTGCGTTTCC TCAGTCCGGA CCTGGCCGGT
GTCGAGCGCA CTTTCGACAT GACCATGTAC ATGCTCATCG GCGGTGCCGG AACGCTGCTC
GGTCCGCTGC TGGGGGCGCT GGGCGTGCCC TGGCTCGCGC AGTACCTGCA GTTCCTGCAG
GACTACCGGT TCATCGTGTT CGGGCCGCTG CTGATCGTGC TGGTCATCTT CCTGCCCGAC
GGCATCGTCG GTTGGGTGCG GGGCCAATGG CTGCGCCGCC GCGCGTCGCA GCCGGCGTCT
GTCGTTGCAC AGGAGCCGGA TCAACAGTCG ACCTCGGTGG GACTGAAGGG AGAGCGCCAT
GCTTGA
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| Protein sequence | MNARTGWGLL LLLGLVFPLL TDNDYHLTVM SSAYIFALAT LGLNLITGYT GQFNLAHAGF
MAIGAYTVGI LTVDHQWPFW AAFCLSGLVP VVLGLPIGLL SLRLKGHFFA IFTMCMGYIL
FLGIEKWESL THGAVGIIGI PVPEALPTPF GDVSFDSPRA LYYLVLGFLT LGLWVMHRIV
GSLLGRTFVA IRNGDDLAES LGINLMRNKL LAFLLSVFYA GTAGGLYAGF VRFLSPDLAG
VERTFDMTMY MLIGGAGTLL GPLLGALGVP WLAQYLQFLQ DYRFIVFGPL LIVLVIFLPD
GIVGWVRGQW LRRRASQPAS VVAQEPDQQS TSVGLKGERH A
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