| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5968 |
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| Symbol | |
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| ID | 7975007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 695232 |
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| End bp | 696182 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644796531 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002947805 |
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| Protein GI | 239820620 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.443129 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGTCG CGACCGTCAG GCTCTTCCTG GAAGTGCTGG AGGCTGGCAG CCTGAGCAAG
GTGGCGGCCC GCCGCCAAAC GGTGCAATCG CACATCAGCC GCCAGATCAG TGACTTTGAA
GCGGGGCTCG GCGGCCCGCT GTTTCGGCGA ACAGGCAGAG GCGTCGTGCC GACCGAACTG
GGAGAGCGCG CGGCAACGCG GCTACGGTCC TGGCTGCTGG AGACGGACCG TTTGTCGGAG
GAACTTCGCG AGGAATCAGG CAAGTTGCTC GGCGAGGTCC GCCTGGGCGT CATACCTTCG
GCAGCCCATC CGCTGATGAC GCGACTCTTT GAACGCCTGC AGGTCGAGCA TCCAGGCATC
CGCCTGAACA TCGCCGAAGC TCAGGGCACC GAACTCAACA CGATGCTCGA CAGCGGTGCC
GTCGACATGG CAATTCTTTT TCGGTTCAAT CGCCCGAGCG GTCACGAAGA AAGGCTGCTG
AGCGTTGCAC ATACCTATCT GATCTCCGCC CCGGGGGACG AGCTCACGAA GGAGGCCACG
GTCAACTTCT CGCGTCTGTC CGGTCTGCAC CTCGTGCTGC CTCGACGTCC CAGTCACTGG
CGCAACGCAC TTGACGAAGC AGCCCGCAGC TTGGGCTTCG CCCTGGTCCC AGTCGCCGAA
GTGGATTCGT TGACGATGCA AAAGGAACTG GTGGCGCACA CGCCGGGGCT CTATTCGATG
ATGGGGCCGT ACTCAATTGC CGAGGAACTC CGACGGGGTC GCCTTCAGGC CAGCAAACTC
GTGAAGCCCG ATCTCTTCCG CCATGTGACC TTGGCGTTTC CGAAGCAGGG CAAGCTTTCA
CCCGCGTGCA GGAGGGCCGC CGAGATCATC CAGCAATTGG TCGGCGCCTG GGGCAGTCAA
CTCACCGAGC CAATAGCCGG TGATGAATCT GGACACGCAC CTGCAAAATA G
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| Protein sequence | MDVATVRLFL EVLEAGSLSK VAARRQTVQS HISRQISDFE AGLGGPLFRR TGRGVVPTEL
GERAATRLRS WLLETDRLSE ELREESGKLL GEVRLGVIPS AAHPLMTRLF ERLQVEHPGI
RLNIAEAQGT ELNTMLDSGA VDMAILFRFN RPSGHEERLL SVAHTYLISA PGDELTKEAT
VNFSRLSGLH LVLPRRPSHW RNALDEAARS LGFALVPVAE VDSLTMQKEL VAHTPGLYSM
MGPYSIAEEL RRGRLQASKL VKPDLFRHVT LAFPKQGKLS PACRRAAEII QQLVGAWGSQ
LTEPIAGDES GHAPAK
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