Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5932 |
Symbol | |
ID | 7974971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | + |
Start bp | 635668 |
End bp | 635955 |
Gene Length | 288 bp |
Protein Length | 95 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644796497 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_002947771 |
Protein GI | 239820586 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGACTTG CGAGATTGGC GGCAGGTTTG CCGCAAGACA AGCTTGGCGT TAAGGCGGGA CTGGATGATG GCACCGCCAG TGCACGCATT TCTCGGTACG AGAGCGGGGT CCATGAGCCA AACATTTCTT TCGCGCATCG GCTGGCAGAC GAGCTTGGCG TTCCGGCCCC CTACTTTTAT GCCGCGGATG ACGAGCTCGC CAAGCTCATC CTGTGGTTCG GTCAGTTGAA CGCCAAACAG CGCAAGTCAC TGCTCGAATT CGCAAGTCAT ATCAAATCAT CTTCGTAG
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Protein sequence | MRLARLAAGL PQDKLGVKAG LDDGTASARI SRYESGVHEP NISFAHRLAD ELGVPAPYFY AADDELAKLI LWFGQLNAKQ RKSLLEFASH IKSSS
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