| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5907 |
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| Symbol | |
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| ID | 7974946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 615138 |
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| End bp | 616175 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644796480 |
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| Product | parB-like partition protein |
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| Protein accession | YP_002947754 |
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| Protein GI | 239820569 |
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| COG category | [K] Transcription |
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| COG ID | [COG1475] Predicted transcriptional regulators |
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| TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.911153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAAAC GGACTTGGGA GAAGACGGAA GCGGCGATTG CCGCACTGGC AAGTGCTGAG
AACGAGGAAC CTCCCACGTC GCGCGGGCGC AGCGGCATCG TCCGCTACAT GTTCGACTTG
CCCGAGCAAG CACGGCAGGA ACGTGACGCG CTTGTGGCGG CGGCCAACAG GCTCAATGGC
GCATTGCCTG TTCGGACCCT GGATGCCTCC TGTGTGCATG CTTCAAGCTG GGCGAACCGT
CACTCCAGCG CATTCTTGTC ACAGGAGTAC GTGGCCCTGA AGGAGGAGAT CCGTTCCTCG
GGAGGAAATG TCCAGCCGAT CAAGGTCCGC CCGATTCCAG TGGGGTCTCC GCGAGCCGTG
TTGCCCGGAG CAACAGAGGC GGCAGCACCT GCGCAACAGT ATGAGATCGT CTACGGCCAT
CGGCGGCACC GAGCCTGCCT CGAACTCGGA CTTCCGGTGC TGACGCTGAT CGAAGATCTT
TCGGATGCCC AGCTGTTCGC GCAGATGGAT CGGGAGAATC GGCAGCGGGA GGATCTGTCG
CCTTGGGAGC AAGGGGTCAT GTACGACCGA GCGCTGCAGG AAGGACTTTT TCCGTCCATG
CGCCAGCTGG CCGAGACCTT GGGCTGCAAT ACTGCGACCG TCAGCCGTGC CGTCGCGCTT
GCACGGCTCC CCGACGAAAT TGTTGTTTTG TTTGCCTCCC CTATGGACTT ACAAACCCGT
TGGGCCGCGC CGCTGACCAA ACTAGCCTCC GAAGGATTGC AGGTCGGTCT CGAACAGGCC
CGCACGCGTC TGAAGGGAAA TCCGCGGATG ACTCCGTCCG AGATCTTTGC GGCGCTCACT
GCGACAGATT CAGCAGCCGG AAATCGGAGG TTCAATGCCA ATCCGGAGAC ATCGACCCTT
TGCCTCGGTG GTCGACGAAT CGGAGAAGTC TTGCAGGACG CAAAATCCGG AACGACGGTT
CGCTTCTACG AGAAGTTGCC GCTGCCCATG TTCAGCGCTG TAGCGCAGGG CATTCAGCGC
GCGTTGGACA AGTTTTGA
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| Protein sequence | MRKRTWEKTE AAIAALASAE NEEPPTSRGR SGIVRYMFDL PEQARQERDA LVAAANRLNG
ALPVRTLDAS CVHASSWANR HSSAFLSQEY VALKEEIRSS GGNVQPIKVR PIPVGSPRAV
LPGATEAAAP AQQYEIVYGH RRHRACLELG LPVLTLIEDL SDAQLFAQMD RENRQREDLS
PWEQGVMYDR ALQEGLFPSM RQLAETLGCN TATVSRAVAL ARLPDEIVVL FASPMDLQTR
WAAPLTKLAS EGLQVGLEQA RTRLKGNPRM TPSEIFAALT ATDSAAGNRR FNANPETSTL
CLGGRRIGEV LQDAKSGTTV RFYEKLPLPM FSAVAQGIQR ALDKF
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