| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5894 |
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| Symbol | |
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| ID | 7975945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 605905 |
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| End bp | 606285 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644796469 |
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| Product | Endoribonuclease L-PSP |
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| Protein accession | YP_002947743 |
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| Protein GI | 239820558 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.151505 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTGAAAG TGCATGTGCC ACCGGACATC TTCACGCCCA TCGGCCCCTA CGCCCAGGCC
ATCGAGGCCT CCTCGGTGGA GCGGCTGCTT TTCATCAGCG GCACGATGGG ACTTGAGCCC
GACGGCCGCT TGGCGGGCGA CTTCGAGGCT CAAGCCACCC GCGTCTGGTC CAACATCGAC
GCCACGCTGA AGGCGGCCGG AATGGAGCGT ACGAACCTCG CCAAGCTCAC CATCTGGCTG
GCGAACCGGG AGGACTGGCG TCTGGGTGCC GAGATCCGTC AACGCTACCT TGGCGACCAC
AAGGTGGCGA TGTCGGTGGT GCAGGCCGGG CTGGTCGATT CGAGTTGGCT GATCGAAGTC
GATGCGATTG CGGTGGCCTG A
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| Protein sequence | MLKVHVPPDI FTPIGPYAQA IEASSVERLL FISGTMGLEP DGRLAGDFEA QATRVWSNID
ATLKAAGMER TNLAKLTIWL ANREDWRLGA EIRQRYLGDH KVAMSVVQAG LVDSSWLIEV
DAIAVA
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