| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5889 |
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| Symbol | |
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| ID | 7975940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 601152 |
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| End bp | 602234 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644796465 |
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| Product | Mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_002947739 |
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| Protein GI | 239820554 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATCA CCGACTTCTC CCTGCATCCC TGCACTCAGA GGCTGCACGA TGCGAACTGG
AAGTTCGCGC GCGCGTCCGT ACCTGGCCTG CAGGCCCACG TACTGACGCT GACCGACGAC
AACGGCTACA CCGGCCACGG CTATGCGCAT GCCATTCCCA GCATCTCCGG CGACGGCGAA
GGTGTGCTGG CCGCGCTGCG TGCCTTGGCG CCGACTCTGG TCGGGCGCGG CCTGGACGAG
ATCGCCGCCA TCGTCGAGAC ATGTGACCGG CAATTGGCCT TCAATGTCTC GGCGAAAGCG
GCCATCGATA TGGCACTGCA CGACTTGCTC GCGCGACGCC TCTGCGTGCC CGTGCACGTC
CTACTGGGCG GGCGCCACCA CGACGTCATT CGCCAGTCCC GCATCGTGCC AGTCAAGACG
CCGGCGCAGA TGGGTGCACA TGCCGCCGAG CTGGCGGCGC AGGGTTACCA GCAACTCAAG
CTCAAACTGT CGGGCGACAC GCAAACGGAC GTCCAGCGAA TCGCATCCGT ACGCGATGCG
GTGGGCGCAG AAGTCGCGTT GACGCTTGAC CCGAACCAGG CCTACAGCGC CAAGACGATG
ATGGCCGCCT TTGCGCGCAT GGAGCGCTAC GACATTGCCT TGATCGAGCA GCCCGTGCCG
GCCGACGACT GGACCGGACT GACGATGCTG ACGAGGTCGC TACCCGCCGC CATCGAGGCG
GATGAAAGCG CGCAGTCGGT ACAGGACGTG TACCGACTGG TGACGGACCG GGTGGTTGAC
GTCATCAATC TCAAGGTGAC CAAGCTCGGC GGGCTGTTGC GCTTCACGCA GGCCGCCGCG
CTGTGCCAGG CCGGCGGCGT GGTCTGCCGC GTCGGTGCGG CGTTCGGACC CGCGCTGATG
CAAGCCTTCG CAGCACATGC GGCCAGCACC CTGCGCTCGC TGCCGTATGC CTGCGAGCTG
GCCGAGCACC AGCACCTGCT GGACGACCCG TTCGAAGCAC TGCCTGTGGA AAACGGCATG
GTGCGCGTGC CGATGTCGGC CGGCTGCGGC ATCGGCTACG CGAGCTCCGC GGAATCTCAC
TGA
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| Protein sequence | MKITDFSLHP CTQRLHDANW KFARASVPGL QAHVLTLTDD NGYTGHGYAH AIPSISGDGE
GVLAALRALA PTLVGRGLDE IAAIVETCDR QLAFNVSAKA AIDMALHDLL ARRLCVPVHV
LLGGRHHDVI RQSRIVPVKT PAQMGAHAAE LAAQGYQQLK LKLSGDTQTD VQRIASVRDA
VGAEVALTLD PNQAYSAKTM MAAFARMERY DIALIEQPVP ADDWTGLTML TRSLPAAIEA
DESAQSVQDV YRLVTDRVVD VINLKVTKLG GLLRFTQAAA LCQAGGVVCR VGAAFGPALM
QAFAAHAAST LRSLPYACEL AEHQHLLDDP FEALPVENGM VRVPMSAGCG IGYASSAESH
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