| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5880 |
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| Symbol | |
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| ID | 7975931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 591001 |
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| End bp | 591858 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796456 |
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| Product | amidohydrolase 2 |
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| Protein accession | YP_002947730 |
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| Protein GI | 239820545 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGAAG CCATCGACAC CGAGGGCGGC TGGGACTGCC ACGCCCACGT CTTCGGCCCT
TATGGCCGCT ATCCGCTGGC GGCCGAGCGC GCCTACACTC CGCCCGAAGC GCCCCTGCCC
GCGTACCGGG CGCACCTTGC CACGCTGGGC CTGACCCACG GCGTGCTGGG CCTGACCCAC
GGCGTGCTGG TGCATCCCAG CGCCTATGGC GTGGACCATG GGCTGGTGCT GGACACCCTG
GACGCGCAAC CGAATCTGCG TGGCGTGCTG GTGGCGCGGC CTCACACCCT GCCTTCGCTC
GCCGGACTGC ATGAACGCCG CGTGCGCGCC TTGCGCTTCA GCGCGCGCGG TGGCGCGGCC
CGCAACTTCG GCGGCAGCGC CAGCTTCGAG GAATTGCAGG CCATGGCCGG CAAAATGGCC
GACGCAGGCC TCCACGCCGA GCTGTGGACC GACCGCCATG TGCTGCCGGG CATCGCCGCC
CAGATCCGGG CGCTGCCAGT GCCTGTGGTC ATCGACCACA TGGCCGGCTT CGATGCTGCC
GCCGGCGTGG ACGAGCCGGG CTTTCGCAGC CTGCTCGATC TGCTGGCCGA AGGCCGGGTG
TGGGTGAAGC TGTGCGCCTA CCGCAACCTG CTGGCCATAC TCGACCGCAC GCGCTGGGCG
GAGCTACTGG CGCCTTTTCA GCAAGCCCTG CAGCAAGCCA ACCCGCGGCA GTTGGTGTGG
GGCAGCGACT GGCCCTACCT CAACGTGAAG GAACCGCCGA GCGGCGGCGA CTTGCTGCAG
CTGCTCCACG AGTCCGTGAG CGATGTGGCC ATCGGCCGGG CCATCCTGCA GGACAACCCG
GCGCGGCTCT ACGCCTGA
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| Protein sequence | MGEAIDTEGG WDCHAHVFGP YGRYPLAAER AYTPPEAPLP AYRAHLATLG LTHGVLGLTH
GVLVHPSAYG VDHGLVLDTL DAQPNLRGVL VARPHTLPSL AGLHERRVRA LRFSARGGAA
RNFGGSASFE ELQAMAGKMA DAGLHAELWT DRHVLPGIAA QIRALPVPVV IDHMAGFDAA
AGVDEPGFRS LLDLLAEGRV WVKLCAYRNL LAILDRTRWA ELLAPFQQAL QQANPRQLVW
GSDWPYLNVK EPPSGGDLLQ LLHESVSDVA IGRAILQDNP ARLYA
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