Gene Vapar_5847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_5847 
Symbol 
ID7975898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand- 
Start bp560693 
End bp561349 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content64% 
IMG OID644796426 
Producthypothetical protein 
Protein accessionYP_002947700 
Protein GI239820515 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCCCG AGGCATTGCC CGGCGGTCCC TGGGAAAAGC TGTTCCCGCG GGCACTGGCG 
CTGATCGACG AGATCAGCCG ATACGGTGGG ATCGCCGATC CGTTCTGGAC CTTCGGCGGC 
GGGACTGTGC TGATGTTCCG CTACCACCAT AGGTTGAGCA AAGACATAGA CATCTTCGTG 
CCCGATCCGC AGTACCTCGG CTTTGTCACG CCTCGGTTGA GCGACACGGC GGCGGACCTG 
ACGCAGGACT ACACCGAGCA GCCTGGCACC TTTGTCAAGC TGCAATTCGA GGAAGGCGAA 
ATCGACTTCG TGGCCGCTCC CAACCTGCTG GCCGAGGCTT GGGAAACCTG GGACATCGGT 
GGCCGCTCCG TGAAGGTGGA GACGGCCGCC GAGATCATTG CCAAGAAGAT GTACCACCGT 
GGCGACCGGG CCACGGCGCG CGATCTGTTC GACCTTGCGC TCGTGATCGA GCGCGAGCCG 
TCCCAGCTCC GAGCGGCAAC GCCGTTCCTG CTGCGCCACC GGGAGGCATT CCTGTCTCAG 
ATTCGGCAGC CGCATGCCGG CTTGCGCGCT GCGTTCGACG CCATCGCCAC GCTGGACTAC 
ACGCCGGGCT TCGACCATTG CGTGACCGTC GTTGGGGAGT TCCTGGTCAG CATGTAG
 
Protein sequence
MKPEALPGGP WEKLFPRALA LIDEISRYGG IADPFWTFGG GTVLMFRYHH RLSKDIDIFV 
PDPQYLGFVT PRLSDTAADL TQDYTEQPGT FVKLQFEEGE IDFVAAPNLL AEAWETWDIG 
GRSVKVETAA EIIAKKMYHR GDRATARDLF DLALVIEREP SQLRAATPFL LRHREAFLSQ 
IRQPHAGLRA AFDAIATLDY TPGFDHCVTV VGEFLVSM