| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5819 |
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| Symbol | |
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| ID | 7975870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 524786 |
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| End bp | 525508 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644796400 |
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| Product | VirB8 family protein |
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| Protein accession | YP_002947674 |
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| Protein GI | 239820489 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3736] Type IV secretory pathway, component VirB8 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCGGG ACGGCTCCCT TGAGAACTAC CTGCGCGAAG CCCAGAACTG GGAACTCGAC
CGCGCGCGTC GGGCGGAGCG ATCGACCGGG ATCGCCTGGG CCGTGGCCAC ATCGGCAGCA
CTGATCGCGA TCCTCGCCGT CGCCGCCGTC AGCGGGCTCA CGCCGCTGAA GCAGCCGGTT
CCCGTTCTCA TTCGGGTCGA CAGCAGCAGC GGCATCGTCG ACATCGTCCC CACCTACGAA
GGCACGACCG ACATTGAGCA GGTCGTGACA CGGAACCTGC TGCAGAACTA CGTGATTGCG
CGCGAGCGTT ATTTCTACGG CACCGCGGAA GCGGACTACG AACTGGTCGC CTCGCAAAAC
TCGCCTCGTC TCAACCAGGA GTGGGCGGCC TTGTGGGCGG CCGACAACCC GGCCTCACCT
CTGAATGTCT ACAAAGACGG CACTTCCATC CGCGCGCAGG TGCAATCGGT CACCTTCCTC
AAGCTGGAGA GCGGAAAGGA CAAGCTGGCA CAGGTCCGCT TCACCCGTTC GACGCGCGCA
GGCGGCACCG GGGAGGAGCA GACCAGCCAC TGGGTCTCCA CGATCGAGTT CGCCTATGTT
CCGCCATCGG CGGACAACAA GGTGCGTTCG CTCAACCCGC TGGGCTTTCG CGTCGTCGAA
TACCGCCGCG AGCCCGAGGT CGCGCCAGCT AGCGTTGCAC CCGTCAGGCA GGATGCACGA
TGA
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| Protein sequence | MSRDGSLENY LREAQNWELD RARRAERSTG IAWAVATSAA LIAILAVAAV SGLTPLKQPV
PVLIRVDSSS GIVDIVPTYE GTTDIEQVVT RNLLQNYVIA RERYFYGTAE ADYELVASQN
SPRLNQEWAA LWAADNPASP LNVYKDGTSI RAQVQSVTFL KLESGKDKLA QVRFTRSTRA
GGTGEEQTSH WVSTIEFAYV PPSADNKVRS LNPLGFRVVE YRREPEVAPA SVAPVRQDAR
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