Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5803 |
Symbol | |
ID | 7974924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | + |
Start bp | 505869 |
End bp | 506192 |
Gene Length | 324 bp |
Protein Length | 107 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644796384 |
Product | hypothetical protein |
Protein accession | YP_002947658 |
Protein GI | 239820473 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.550246 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAAAT CGGACCTCTT TAGGGAAGCG ATCAAGACCT TCGTGAGGGT GCAAGCGGCC AAGCGACTTG CAGCCCTCGG GCGGCGTGCG CCCAAGATGC CCGTCTATTT CCAGCACCTG CCGCAGATGC AGCAGGCGAA CTGGCGAGAG GTGCTCGTCC TGATCGAGAA GGAACGCCTC TTTGGATGGG GGTACGGGCT CGTCAACCTG ACTCTGCTGG CATCCACGCT CATGACTCCA GGGGCCGAGT TGTGGACCTT GGACAGACGC CTGGGCGACT TGGCACAGCG ATTTGCAGCG GCCCACCGCC CGGTCGAACG TTGA
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Protein sequence | MDKSDLFREA IKTFVRVQAA KRLAALGRRA PKMPVYFQHL PQMQQANWRE VLVLIEKERL FGWGYGLVNL TLLASTLMTP GAELWTLDRR LGDLAQRFAA AHRPVER
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