| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5792 |
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| Symbol | |
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| ID | 7974913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 493524 |
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| End bp | 494504 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644796373 |
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| Product | hypothetical protein |
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| Protein accession | YP_002947647 |
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| Protein GI | 239820462 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCAT TCCTTTCCCG GCGCAAGCTC ACGGCATGGT GCCTGGCGCT CGCCGCCGGT
GCCGCTCCCC TGGCCCACGC CCAGGCGCCC GCGCTCGATG GCGCGCTCAC GCTCGTGGTC
GGCTACACCG CCGGCGGCAG CACCGACCGC ATCGCGCGCC TGGTCGCCGA GCGGCTGGGC
CCCAAGCTGG GCGTGGCCGT CACGGTGGAG AACCGACCCG GCGAAGGCGG CCGGCTCGCG
GCCAAGGAGC TCCGGCGCGC GCCCGCGTCG CAGAACGTGC TGATGCTCGG CAATCCCGCG
GTGATGGTGG TGGCGCCGCT CGTCTTCAAG GACGCGGGTT ACGACGCCGA GAAAGACTTC
GTGCCGGTGT CGCAGGTCAG CAGCTACGAC TTCGCGCTGG CCGTGGGCAA CAAGCTCCAG
CTCGACCGCG CGATGTTCCT GGTCGGCCGG CTCTGGGCGC ATCCCGAAGA GGCCGTCTTC
GGCGTGCCGG CCACCGGCAG CCTGCCGCAC TTCTTCGGCC TGATGGTGGG CGACGCGCTG
AGCGTGCAGC CGCAGATCAA GGGCTACGGC GGCTCGGCGC CGCTGTCGGC CGACCTGAGC
GGCGGCAGCC TGCCGATTGC CATCGACACG CTCGACTCGC TCTACGGCCA GCACGTGGCC
GGCAAGATCC GCATCCTGGC CGTGTCGGGC AAGCAGCGCG TGAGCTTCGC GCCGGGCATC
CCCACCTTCC GCGAAGCCGG CATGAAGATC GATGCCGACG GCTGGAACAC CTTCTTCGCC
CCGGCCACGA TGCCGCCGGC CAAGGTGCAG CTGCTGTCCA CCAGGATCCG CGAAGTCATG
CAGGACCCGG CGCTGCAGAA GGCTGCCAAC GCCGCCTACA TCACGCCCAT CGTGAGCACG
CAGGCCGAGA CCGTGCAGAT GCTCAAGGCC TTCCGCCAGC AGTGGGAGCC GGTGGTGCGG
CGCTCGGGGT TTCAGCCCTG A
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| Protein sequence | MTAFLSRRKL TAWCLALAAG AAPLAHAQAP ALDGALTLVV GYTAGGSTDR IARLVAERLG
PKLGVAVTVE NRPGEGGRLA AKELRRAPAS QNVLMLGNPA VMVVAPLVFK DAGYDAEKDF
VPVSQVSSYD FALAVGNKLQ LDRAMFLVGR LWAHPEEAVF GVPATGSLPH FFGLMVGDAL
SVQPQIKGYG GSAPLSADLS GGSLPIAIDT LDSLYGQHVA GKIRILAVSG KQRVSFAPGI
PTFREAGMKI DADGWNTFFA PATMPPAKVQ LLSTRIREVM QDPALQKAAN AAYITPIVST
QAETVQMLKA FRQQWEPVVR RSGFQP
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