| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5788 |
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| Symbol | |
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| ID | 7974909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 490258 |
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| End bp | 491223 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644796369 |
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| Product | alpha/beta hydrolase fold protein |
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| Protein accession | YP_002947643 |
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| Protein GI | 239820458 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACA CCGATCTCAG CTCCGCCGCC CCCTCTGCGC CCACCCGCCG CGCCCTGCTT
GGCGGCGCCG TCGCCGTGGG CGCCGCCTTG GCCATGGGCC GCGCCGCACA TGCGGCACCC
GCCGCCGACG CGGTGCCGGG CTTCCGCTCG GGCAGCGCGG AGGTGAACGG CACCCGCATC
CACTACCGCA TCGGCGGCAG CGGGCCGACC GTCGTGCTGC TGCACGGCTA TGCCGAGACC
GGGCACATGT GGAACCCGCT GATGCCGCTT CTGGCCAAGA CGCACACCGT GGTCGTGCCC
GATCTTCGGG GTGCCGGCGA TTCCTCGAAG CCCGAGACGG GCTATGGCAA GAAGAACATG
GCTGTCGACA TCCACGAGCT TGTGCGCTCG CTCGGCATTC GCAGCGTCAG CATCGTCGGC
CACGACATCG GCCTGATGGT GGCCTACGCA TATGCCGCGC AGTTTCCTTC GGAAACCGAC
AAGGTGGTGC TCATGGACGC CTTCCTGCCC GGCATCGGCG AATGGCAAAA CGTCTGGCTC
CTGCGCGACC TGTGGCATTT CCATTTCCAC GGTGCGACGC CGCTGGCGCT CGTGAAAGGA
CGCGAGCGCA TCTATTTCGA GCACTTCTGG AACGACTTTG CGGCCGACTC CAAGCACTCG
GTGCCCGAAG CCGACCGCCA GTTCTATGCC AGGGCCTATG CACAACCCGG AGGCATGCGT
GCAGGGTTTG AATATTTCAA GGCTTTCGAG CAGGATGCAG CCGAGTTCGC CGAACTCGGC
AAGACGCCGC TGCCCATGCC GATGCTGGTG CTCTCCGGTG AAAAAGCCGG TGGAACCTTC
CTGATCGAGC AGGGAAAGAT GGTTGCGACC AACGTGCAGG GCGTCCTCGT CAAAGGCTCC
GGGCATTGGT TGATGGAAGA GGCGCCAGAG CAGGTCATTC CGGCATTGAT CAATTTCCTG
GGCTAG
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| Protein sequence | MTDTDLSSAA PSAPTRRALL GGAVAVGAAL AMGRAAHAAP AADAVPGFRS GSAEVNGTRI
HYRIGGSGPT VVLLHGYAET GHMWNPLMPL LAKTHTVVVP DLRGAGDSSK PETGYGKKNM
AVDIHELVRS LGIRSVSIVG HDIGLMVAYA YAAQFPSETD KVVLMDAFLP GIGEWQNVWL
LRDLWHFHFH GATPLALVKG RERIYFEHFW NDFAADSKHS VPEADRQFYA RAYAQPGGMR
AGFEYFKAFE QDAAEFAELG KTPLPMPMLV LSGEKAGGTF LIEQGKMVAT NVQGVLVKGS
GHWLMEEAPE QVIPALINFL G
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