Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5779 |
Symbol | |
ID | 7974900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | - |
Start bp | 483608 |
End bp | 484420 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644796360 |
Product | Methyltransferase type 11 |
Protein accession | YP_002947634 |
Protein GI | 239820449 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.796207 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACCA CGTCCTCGAC CTTCGTCGCC ACCGACGGCG ATGGCTATGA ACGGCTGATG GGCCGCTGGA GCCGCCTTCT TGCGCTGCCT TTCCTCGACT TTGTCGCCAC CGCGGACGGC GACCGCATCC TCGACGTCGG ATGCGGCACC GGCCACCTGA CTTTCGCCGT GGCCCGCCGC ACCGGCGCCG GCGAAATGCG GGGCGTGGAC ATCGCGCTGC CCTACATCGA GCATGCCAGG CGCCACAACG AGGATGCGCG CATCGTCTTC GAGGTGGGCG ATGCCTGTTC GCTGCCGTAT CCGGCGCAAA GCTTCGACCG CGTGCTCTCG CTGCTGGTGC TGCACTTCGT GCCGGAGCCG GGCAAGGCCA TTGCCGAGAT GCGCCGCGTC GCCCGGCCCG GCGCGGTGGT CGGTGCGGCG GTGTGGGACG CGCGCGGCGG CTGGGTCTCC AACCGCATGT TCTTCGACAC CGCCGCCATG CTCGACCCCG AGGCCGGCGC CCGCCGCGCC CGCAACTACA CGCGGCCCCT CACGCGGCCC GGTGAACTGG CCCGGGCCTG GCGCGACGCG GGGTTCAAGG GCGTGGAAGA AACGACGCTC GCCATCCGCA TGGAGTTTGC CTCGTTCGCC GACTACTGGG CGCCCTTCGA GGGCAAGGAC GGGCCCGGCG CGGAATACGT CGCGACGCTC GATGCGGATG CGCGCTCCAG GCTGCGCGAG GCGGTCGAGG CGGCCTACCT CGACGGCGAA GCCGATGGCG CGCGCTCCTA TGCCGCGCTC GCGTGGGCCG TCAAGGGCAC GGCGCCGGCG TAG
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Protein sequence | MSTTSSTFVA TDGDGYERLM GRWSRLLALP FLDFVATADG DRILDVGCGT GHLTFAVARR TGAGEMRGVD IALPYIEHAR RHNEDARIVF EVGDACSLPY PAQSFDRVLS LLVLHFVPEP GKAIAEMRRV ARPGAVVGAA VWDARGGWVS NRMFFDTAAM LDPEAGARRA RNYTRPLTRP GELARAWRDA GFKGVEETTL AIRMEFASFA DYWAPFEGKD GPGAEYVATL DADARSRLRE AVEAAYLDGE ADGARSYAAL AWAVKGTAPA
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