| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5777 |
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| Symbol | |
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| ID | 7974898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 481575 |
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| End bp | 482579 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644796358 |
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| Product | hypothetical protein |
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| Protein accession | YP_002947632 |
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| Protein GI | 239820447 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.228941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACGA CATCGATGCT GGTACGAAGG CTCTGCGCGG CCGCAGGCCT GGCGCTTCTG
CTCAGCGCGC CGGCCTTGGC ACAAACAGCC ACGCAAACGG CCGCGCACTC CGCCTATCCG
AGCCAGCCGC TCAAGCTGAT CGTGCCCTAC CCCGCCGGCG GCGCCACCGA CGCGCTGGCG
CGCACCATCG GCCAGAAGCT GCAGGAAGCC TGGGGGCAGA CTGTGCTGGT GGAGAACCGC
CCCGGCGCCG GCGGCACCAT CGGCAACGGC TTCGTCGCCA AGGCGCCGGC CGACGGCCAC
ACGCTGCTCA TCGCCATCAC CGCGCTGATC CAGCAGCCGC CGCTCATGGA CAAGCTCGCC
TACGACCCAC TGAAGGACTT CGCGCCCGTC ACCATGATTG CGCGCAGCCC CAGCATGCTG
GCCGTGCCGC TCGATTCGCC CGCAAAGAAC CTCAAGGACT TCATCGCGAT GGTGAAGCAG
AGCCCCGGCA AGTACAACTT CGGCAGCTAC GGCGCCGGCA CTTCGTCGCA CATCCAGGGC
GCGCTGTTGA ACATGCAGGC CGGCATCGAC CTGGTGCACG TGCCGTTCCA GGGCGCCGCG
CCACTGGTCA CCAACCTGGT GGGCGGCCAG CTCGCCTCGG CCTTCATCGA CAGCGCCACC
GCGCGGCCGC ACCTCAAGTC GATGCGCCCG CTGGCCGTGA CCGGCACGCA GCGCATGCCC
GGCCTGCCCG ACGTGCCCAC CTTCGCCGAG CTGGGCTTTC ACTCCTTCGA CCCCTACGGC
TGGTTCGGCG TGTTCCTGCC CGCCGCCACG CCCGCGCCGG TGGTGCAGAA GCTGTCCGAC
GAGATCGACC GCATCGTGCA CCTGCCCGAC GTGAGCGCCA AGATCGAGGC GCTGGGCCTG
CAGGTGGCCG GCGGCAAGCC CGAAGCGTTC CAGAAGGTGG TGCGCGCCGA TGCGGCCATC
TACGCGAAGA TCATCAAGGA CGCGAACATC CGCCTCGCGC AGTGA
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| Protein sequence | MKTTSMLVRR LCAAAGLALL LSAPALAQTA TQTAAHSAYP SQPLKLIVPY PAGGATDALA
RTIGQKLQEA WGQTVLVENR PGAGGTIGNG FVAKAPADGH TLLIAITALI QQPPLMDKLA
YDPLKDFAPV TMIARSPSML AVPLDSPAKN LKDFIAMVKQ SPGKYNFGSY GAGTSSHIQG
ALLNMQAGID LVHVPFQGAA PLVTNLVGGQ LASAFIDSAT ARPHLKSMRP LAVTGTQRMP
GLPDVPTFAE LGFHSFDPYG WFGVFLPAAT PAPVVQKLSD EIDRIVHLPD VSAKIEALGL
QVAGGKPEAF QKVVRADAAI YAKIIKDANI RLAQ
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