Gene Vapar_5732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_5732 
Symbol 
ID7975785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand+ 
Start bp441736 
End bp442248 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content68% 
IMG OID644796313 
Producthypothetical protein 
Protein accessionYP_002947587 
Protein GI239820402 
COG category[R] General function prediction only 
COG ID[COG0645] Predicted kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGATGG TTCTCGGTGG ATTGCCGGGC ACCGGCAAGA CCACCATCGC GCGCGAACTC 
GCTGCCCGCT TCCCCTGCGC CTATCTGCGC ATCGACACCA TCGAGCAAGC GCTCATCCGA 
TCGGCGGCTC TCGAGGAAGT GGGCCCCGCC GGCTACGCCG TGGCCTGCGA GCTTGCCCGG 
TCCAATCTCG CGCTCGGCAT GTCGGTGATC GCCGATTGCG TCAATCCGCT CCCGGTCACC 
CGCGAGGCAT GGCGTGCAGT GGCAGCCAGC ACATCCTCGG GCCTGCTCGA GCTCGAGATC 
GTGTGCTCCG ACCCCGTCGA GCACCGCAGG CGCGTGGAGA GCCGGAAGGC TGACATTTCG 
GGCCACGTTC CGCCGACCTG GGAGGCAGTC GCGCGCCATG AATACGAGGC CTGGACCACC 
AGCCGCCTCG TCATCGATTC GGCGGTCGTC AGCGCAAGCG AGGCGGCCAC GCTGATCCTG 
GACCGGCCGC GCAGCCAAGC CGCAGGCGAG TAA
 
Protein sequence
MLMVLGGLPG TGKTTIAREL AARFPCAYLR IDTIEQALIR SAALEEVGPA GYAVACELAR 
SNLALGMSVI ADCVNPLPVT REAWRAVAAS TSSGLLELEI VCSDPVEHRR RVESRKADIS 
GHVPPTWEAV ARHEYEAWTT SRLVIDSAVV SASEAATLIL DRPRSQAAGE