Gene Vapar_5720 details

Gene Information

• Locus tag: Vapar_5720
• ID: 7975773
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012792
• Strand: +
• Start bp: 433558
• End bp: 434151
• Gene Length: 594 bp
• Protein Length: 197 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 644796301
• Product: NADPH-dependent FMN reductase
• Protein accession: YP_002947575
• Protein GI: 239820390
• COG category: [R] General function prediction only
• COG ID: [COG0431] Predicted flavoprotein

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACACGCA GCACATCGAT CGCCGGCATC CGCCTGCTCG GCATTTCCGG GAGCATCCGG 
CGCGACTCTC ACTGCACTGC GGTGCTGCGC AGCCTGCAGC CGTTGCTGCC TGCGCCGGCA 
ACCATCGAGC TCTTTGCGCT GAACGATGTT CCGCTCTACA ACGCCGACCT GGACGGCGAT 
GCGCCGCCCG CAGCCGTGGC CCGGCTCAAG GCAGCGATTG CAGAGGCCGA CGGCCTGGTC 
CTGTGCTCGC CCGAATACAA CTACGGCATG CCCGGCGTGC TGAAGAATGC GATCGATTGG 
GCATCGCGGC CCAGCTTCGC CTCGCCGCTC AAGGGCAAGC CGGTCCTGAT CGCGACCGCC 
TCGCCCGGCA CCGCGGGCGG CGTGCGCGCG CAGGCGCAGA TCCGCGATGC CCTGGCCGCC 
ACGCTCGCGC GGCCCGTGGT GCGGCAGCAC GTCGCCATTG CGAACGTTGC CACGCGCATC 
CGCGACGGCC GGCTCCATGA CGAACCGACG CTCGACTTCC TGCGGGCGGC GCTCGCCGAT 
CTGCTCCGGG AGATCGAATT GCTGGACGGC GCCGCGTCCC TCCAGTCCCT CTAG 

 

Protein sequence

MTRSTSIAGI RLLGISGSIR RDSHCTAVLR SLQPLLPAPA TIELFALNDV PLYNADLDGD 
APPAAVARLK AAIAEADGLV LCSPEYNYGM PGVLKNAIDW ASRPSFASPL KGKPVLIATA 
SPGTAGGVRA QAQIRDALAA TLARPVVRQH VAIANVATRI RDGRLHDEPT LDFLRAALAD 
LLREIELLDG AASLQSL