| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5705 |
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| Symbol | |
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| ID | 7975758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 419916 |
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| End bp | 421016 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644796287 |
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| Product | ABC transporter related |
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| Protein accession | YP_002947561 |
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| Protein GI | 239820376 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGAGA TCCAACTCCA ATCCATCAGC AAGCGCTTCG GCGATGTCGA GGTGATCCCC
GGCATCGATC TCACCATGCC CGACGGCCAG GTCACGGTGC TGCTCGGGCC TTCGGGCTGC
GGCAAGTCGA CCTTGCTGCG CATGATCGCG GGGCTGGAGA CGCCGAGCGG CGGCCAGGTG
CTGGTCGGCG GCCGCGTGGT GAACGATGTG CCGCCCGCCG AGCGCGGCTG CGCGCTGGTG
TTCCAGAACT ACGCGCTCTA TCCGCACAAG ACGGTGCGGC AGAACCTCGC CTTTCCGTTG
CGCATGGCCA AGGCCACGGC CGCCGAGCAG GAGCGCAGCG TGGACGAGAT CGCGCACAAG
CTCGAGCTCA CGCCGCTCCT GGAGCGCTAT CCGCGCCAGC TCTCGGGCGG CCAGCGCCAG
CGCGTGGCGA TGGGCCGCGC GATGATCCGC AAGCCCGAGG TGTTCCTCTA CGACGAGCCG
CTGTCGAACC TCGACCTCGA GCTGCGCGTG AAGCTGCGCC TGGAGATCGC GCGCATGCAG
CGCACGCTGA AGGCCACCGC CGTCTACGTG ACGCATGACC AGACCGAGGC CATGACGCTG
GCCGACCAGA TCGTGGTGCT GCGCAAGGGC CGCATCGAGC AGGTGGGCTC GCCGCTCGCG
CTGTACCGCT CGCCCGCCAA CCTGTTCGTG GCCGGCTTCA TCGGCACGCC GCGCATGAAC
TTCTTCAAGA TCGATGCCGC GCAGGCCGAC GCGAACGGCA CGCGGCTGCG GCTCGGCGAT
GCCCGCGTGC AGATCCCGCG CCACGTGCCG GGCCAGCCCG TCATGCTGGG CTTTCGCGCC
GAGCAGGCCC GCATCGGCGA ACCTGCGCCC GGCGAAGTGC TGCTCGAACT GCAGGGCTGC
GAAACGCTGG CGATCGAGCA GCTGGGCGAT CGCGCGTACT GCTATCTGCG CTCGTCGCTT
GGCGAGTTGG TGCTCATGGC GCCCGATGCT GCGGCGGACC TCTCGGGCAC CCTGCGCCTG
GCCATCGCGC CGGCCTCGCT TCATTTCTTC GATACCGAGG GTATGGCCTT GGGCAGCGAG
GAGCGGCGGC TGGCGGCTTG A
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| Protein sequence | MAEIQLQSIS KRFGDVEVIP GIDLTMPDGQ VTVLLGPSGC GKSTLLRMIA GLETPSGGQV
LVGGRVVNDV PPAERGCALV FQNYALYPHK TVRQNLAFPL RMAKATAAEQ ERSVDEIAHK
LELTPLLERY PRQLSGGQRQ RVAMGRAMIR KPEVFLYDEP LSNLDLELRV KLRLEIARMQ
RTLKATAVYV THDQTEAMTL ADQIVVLRKG RIEQVGSPLA LYRSPANLFV AGFIGTPRMN
FFKIDAAQAD ANGTRLRLGD ARVQIPRHVP GQPVMLGFRA EQARIGEPAP GEVLLELQGC
ETLAIEQLGD RAYCYLRSSL GELVLMAPDA AADLSGTLRL AIAPASLHFF DTEGMALGSE
ERRLAA
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