| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5693 |
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| Symbol | |
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| ID | 7975746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 407894 |
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| End bp | 408952 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644796275 |
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| Product | Rieske (2Fe-2S) domain protein |
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| Protein accession | YP_002947549 |
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| Protein GI | 239820364 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCCCGA AAAACACCTG GTACGTGGCC TGCACAGGCA ACGAGATCGA CGACAAGCCC
CTGGGCCGCA AGATCTGTGG CGAGAACCTG GTGCTCTACC GCGCAGCGGA AGGCAAGGCC
ACGGCGCTGG AAGACTTCTG CCCGCACCGC GGCGCGCCGC TGTCGCTGGG CCGCGTGGTC
GAGGGCAAGC TGGTGTGCGG CTACCACGGG CTGGAGATGG GCTGCGACGG CAAGACCGTC
GCCATGCCCG GGCAGCGCGT GCGCGGCTTT CCGCCGATCC GCTCCTTCCC GGTGATCGAG
CGCTACGGCT TCGTCTGGAT CTGGCCCGGC GACCCTGCGC TGGCCGACCC GGCCAAGCTG
CATCACCTCG AATGGGCCGA AAGCCCCGAC TGGGCCTACG GCGGCGGCCT GTTCCACATC
CAGTGCGACT ACCGCCTGAT GATCGACAAC CTGATGGACC TGACGCACGA GACCTACGTG
CACTCGACCA GCATCGGCCA GAAGGAAATC GACGAGACGC CCACCACCAC CAAGACCGAG
GGCGACCAGG TCACCACCAG CCGCTTCATG GAGAACATCT CGGCGCCGCC CTTCTGGCGC
ATGGCGCTGC GCGGCAACCA CCTGGCCGAC GACGTGCCGG TCGACCGCTG GCAGATCTGC
CGCTTCACGC CGCCCAGCCA CGTGCTGATC GAAGTGGGCG TCGCCCACGC CGGCAAGGGC
GGCTACGACG CCGATCCGGC GCACAAGGTG TCGAGCATCG TGGTGGACTT CATCACGCCC
GAGACCGAGA CCTCGCACTG GTACTTCTGG GGCATGGCGC GCAACTTCCA GCCGCACGAC
AAGGCGCTGA CCGCATCGAT CCGCGAAGGC CAGGGCAAGA TCTTCAGCGA AGACCTGGAG
ATGCTCGAAT CCCAGCAGCG CAACCTGCTC GCGCATCCGA ACCGCTCGCT GCTGAAGCTC
AACATCGACT CGGGCGGCGT GCAGTCGCGC CGCGTGCTGG AGCGCCTGAT CGCGCAGGAA
GGCCAGGCCC CGGCGACGGC TCCGGCAGGT GCGGCATGA
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| Protein sequence | MFPKNTWYVA CTGNEIDDKP LGRKICGENL VLYRAAEGKA TALEDFCPHR GAPLSLGRVV
EGKLVCGYHG LEMGCDGKTV AMPGQRVRGF PPIRSFPVIE RYGFVWIWPG DPALADPAKL
HHLEWAESPD WAYGGGLFHI QCDYRLMIDN LMDLTHETYV HSTSIGQKEI DETPTTTKTE
GDQVTTSRFM ENISAPPFWR MALRGNHLAD DVPVDRWQIC RFTPPSHVLI EVGVAHAGKG
GYDADPAHKV SSIVVDFITP ETETSHWYFW GMARNFQPHD KALTASIREG QGKIFSEDLE
MLESQQRNLL AHPNRSLLKL NIDSGGVQSR RVLERLIAQE GQAPATAPAG AA
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