| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5692 |
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| Symbol | |
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| ID | 7975745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 406512 |
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| End bp | 407849 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796274 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002947548 |
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| Protein GI | 239820363 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00895] benzoate transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.419889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACCCACG ATCTACGCAA GACCTTCGAT GAAGGCCCCA TGAGCCGCTT CCAGTGGAGC
GCGATCACGA TCTGCATCAC GCTGATCATG CTCGACGGCT TCGACGTGCT GGTCATGGCC
TTCACCGCGG CCAGCGTGTC GGCCGAGTGG AAGCTCAGCG GCGCGCAGCT CGGCGTGCTG
TTCAGTGCCG GCCTGTTCGG CATGGCTGCC GGCTCGCTGT TCCTCGCGCC GCTGGCCGAT
CGCTTCGGAC GGCAAACCGT CATCCTGCTG TGCCTGGTGG TGATCGCGCT CGGCATGGGG
CTGTCGGCGC TGTCCCAGAG CAGCACGCAG CTGGCGGCGC TGCGCGCGCT CACCGGCCTG
GGCATCGGCG GCATGCTGGC CAGCGTGGGC GTCATCACCT CCGAATACGC CTCGAACAAA
TGGCGCAGCA CCGCGGTGGC CCTGCAGGCG ACCGGCTATC CGATCGGCGC GACCATCGGC
GGCAGCATTG CCGCGGTGCT GCTGGAGCAC TACGGCTGGC GTTCGGTCTT CGTCTTCGGC
GGCCTGGCCA CGGCGCTGAT GATTCCGCTG GTGCTGTGGC GCCTTCCCGA ATCGGTCGAC
TTCCTCGTCT CCAGGCGCCC CGCCGGCGCG CTGCGCAAGC TCAACGCGCT GCTGCGCCAG
ATGAAGCGCC CCGAACTGGC CGAACTCCCG CCGCTGCCGC CGGCCGGCGA GCGCTCCGCC
TCCACGGTGG CGAGCCTGTT CAACGCAGGC CTGGCGCGCT CGACGCTGCT GCTGTGGGCC
GCGTTCTTCC TCTTGATGTT CGGCTTCTAC TTTGCGCTCA GCTGGACGCC GAAGCTGCTG
GTCTCGGCGG GGCTGTCGGC GCGCGAGGGC ATCACCGGCG GCGTGCTGCT GAACATCGGC
GGCATCGTCG GCGGCAGCCT GTTCGGGCTG CTCGTCGCGC GGCTGGACCT GGGGCGCCTG
ACGGCCGCCA GCCTCGTCAT CACGGCGCTG GCCATGGCGG CATTCGGCGC GGCCACCGGG
CACCTGGGCG CGTCGTTCGC GATCGCCTTC CTGATCGGCG GATTCATCTT CGGCTCGATG
GCCGGGCTCT ATGCGTTCGC ACCGGTGATC TACCCGGCCG CCGTGCGCAC GACCGGCATG
GGATGGGCGA TCGGCATCGG CCGCATCGGC GCCATCCTCG CGCCGCTCAT CGCCGGGATG
CTGCTCGACC GCGGCTGGCA GCCGCCGCAT CTCTACTACG CCTACGCGCT GCCGCTGGTG
GCGGCGATGG CGGCCGTGCT CGCGCTGCGC CGCAGCGCCA AGGCACAGCC GGCCGGCCGC
GTGGCCAGCG CCCATTGA
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| Protein sequence | MTHDLRKTFD EGPMSRFQWS AITICITLIM LDGFDVLVMA FTAASVSAEW KLSGAQLGVL
FSAGLFGMAA GSLFLAPLAD RFGRQTVILL CLVVIALGMG LSALSQSSTQ LAALRALTGL
GIGGMLASVG VITSEYASNK WRSTAVALQA TGYPIGATIG GSIAAVLLEH YGWRSVFVFG
GLATALMIPL VLWRLPESVD FLVSRRPAGA LRKLNALLRQ MKRPELAELP PLPPAGERSA
STVASLFNAG LARSTLLLWA AFFLLMFGFY FALSWTPKLL VSAGLSAREG ITGGVLLNIG
GIVGGSLFGL LVARLDLGRL TAASLVITAL AMAAFGAATG HLGASFAIAF LIGGFIFGSM
AGLYAFAPVI YPAAVRTTGM GWAIGIGRIG AILAPLIAGM LLDRGWQPPH LYYAYALPLV
AAMAAVLALR RSAKAQPAGR VASAH
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