| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5675 |
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| Symbol | |
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| ID | 7975728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 381937 |
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| End bp | 382863 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644796258 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002947532 |
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| Protein GI | 239820347 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.716061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCCCCG GCAACCGACC CCTCGACCTC GAATGGCTGG AAGACTTCCT GGCCCTGGCC
GAGAGCGGCA ATTTCTCGCG CGCGGCGCAG GCGCGCTCCA TCGCCCAGCC GGCCTTCAGC
CGCCATATCC GCGCGCTCGA GGAGTGGGTG GGGGTCGACC TGTTCGACCG CAGCGCGCAC
CCGGCCGCGC TCACGGCGGC GGGCAAGCGC TTCCAGCCGC TGCTGCAGGA GGTGCTGGCC
GCGCTGGAGG CCGCGCGCAT CAAGACGCGC GCGGCGCACG ACATGGCCGC GGCGAGCCTG
AGCTTTGCCG CCACGCACGT GCTGTCGCTG ACCTTCTTTC CGCGCTGGCT GGCCAGCGTG
GAGGCGCGGC TGAGCCTGGG GCCGATCCAG ACCATCTCCG ACAGTTCGCA GGCCTGCGAA
GACCTGATGC TGCAGCGCCG CGTGCAGTTC GTGCTGTGCC ATGGCCATGC GCATGCGCCC
GGCCGGCTCG ACGAAGCGCA GTACCCCATG CAGCGCTTGA GCGACGACGT GCTCGTGCCG
GTGGCGGCGC CGGATGCGCG CGGCCTGCCG CTGCATGCGC TGGGCACGCA GCAGGCGCCG
TCGGTGCTGG CCTACAGCGA GGCCTCGGGG CTGGGGCGGA TCATGCGGGC GATCCAGGAC
ATCGAGTTCG GCAAGGACTT CGCGCCTTCG CTGTCGGTGG TCTTCACGGC GCACCATGCC
GCGCTGCTGC GGACCATGGC GCTCGAAGGG CGCGGCCTCG CATGGCTGCC GATGAGCCTG
GTGGCGGACG ACCTGCGCGG CGGCACGCTG GTGGATGCCG GTGCAGGCGG CTGGCGGGTG
CCGGTGGACA TCCGGCTGTA CCGGCAGCAG GCCCACATGG CGCCCATGGC CGAGGCGCTG
TGGGACCTGG TGAAGGACGG CGCCTGA
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| Protein sequence | MGPGNRPLDL EWLEDFLALA ESGNFSRAAQ ARSIAQPAFS RHIRALEEWV GVDLFDRSAH
PAALTAAGKR FQPLLQEVLA ALEAARIKTR AAHDMAAASL SFAATHVLSL TFFPRWLASV
EARLSLGPIQ TISDSSQACE DLMLQRRVQF VLCHGHAHAP GRLDEAQYPM QRLSDDVLVP
VAAPDARGLP LHALGTQQAP SVLAYSEASG LGRIMRAIQD IEFGKDFAPS LSVVFTAHHA
ALLRTMALEG RGLAWLPMSL VADDLRGGTL VDAGAGGWRV PVDIRLYRQQ AHMAPMAEAL
WDLVKDGA
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