| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5674 |
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| Symbol | |
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| ID | 7975727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 381046 |
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| End bp | 381930 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796257 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002947531 |
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| Protein GI | 239820346 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.949814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATCC GCCACCTCCG CTGCCTTATC GCCGTGGCCG AAGAGCTGCA CTTCGGGCGC
GCGGCGCAGC GCCTGAACCT GTCGCAGCCG CCCGTGAGCC TCGCGATCAA GGAGATGGAG
GAAGAACTGG GCGTCACGCT GTTCGAGCGC ACCTCGCGCC GCATCGCGAT CACGCGCGCT
GGGGACGAAG CGCTTCGCGA TGCGCGCGCC GTGCTGCTCG GCATGGACAC GCTGCGCCGG
CGCGCGCAGG AGGCCGCGGC CGGGCTCATG GGATCGATCT CGATCGGCTT CATCAGCCTG
CCGGCCTATT CGTTCTTGCC GCGGGTGCTG CGGCAGTTCT CGGACGAGAA CGAGCGGGCC
GAGATCGCGC TGTGGGAGGG CACGACCGAC CAGATCATCG GCGACGTCGA ATCGGGCCGG
CTCGACGTGG GCCTGGTGCT GCAGCCGTCC AGCATGCCCG CCTCGCTGGG CTCGCGGCTG
GTGCAGAAGG ATGCGCTGAT CCTCGCGATG CCCGAGGCGC ATCCGCTGGT GCGGCCCGGC
AGCATTGCGC TCGAAAAATT CTCGGGCGAG CGCTTCCTGG GCTTCGAGCG GCACTTCGGG
CCGCAGGTGT TCGATGCGAT CGTGGCCACC TGCATGCGGC GCGGCTTCAG CCCGCGCCTG
TTTCCGGCGC GCCAGATGCA CACCATCGTG AGCCTGGTCT CGGGCGGGCT GGGCGTGGCG
CTGGTGCCGG CCTGCGTCAA GGCGCTGCAC CGCGAAGGCG TGGCGTACCG CTCGCTCAAG
GGCGAGAAGA CCTACATCGA CACCCTGGCG GTGTGGCGCA AGGCGGACGA TTCGCCGCTG
GTGCGCGCAC TGCTGGCGCT GCTGCCGACG CTCAGCAGCG TCTGA
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| Protein sequence | MEIRHLRCLI AVAEELHFGR AAQRLNLSQP PVSLAIKEME EELGVTLFER TSRRIAITRA
GDEALRDARA VLLGMDTLRR RAQEAAAGLM GSISIGFISL PAYSFLPRVL RQFSDENERA
EIALWEGTTD QIIGDVESGR LDVGLVLQPS SMPASLGSRL VQKDALILAM PEAHPLVRPG
SIALEKFSGE RFLGFERHFG PQVFDAIVAT CMRRGFSPRL FPARQMHTIV SLVSGGLGVA
LVPACVKALH REGVAYRSLK GEKTYIDTLA VWRKADDSPL VRALLALLPT LSSV
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