Gene Vapar_5673 details

Gene Information

• Locus tag: Vapar_5673
• ID: 7975726
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012792
• Strand: -
• Start bp: 380376
• End bp: 380927
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 644796256
• Product: hypothetical protein
• Protein accession: YP_002947530
• Protein GI: 239820345

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTCGAGA AACTGATGGG GCTGCCGCGC TCGCGCACGG TGGTGCATCC GGGGCCTTTC 
CGGCCCGTGC GCATCGATCG CATGCGCGAC CAGAAGGGCC GGCACTTCCG GCTTGCGCTG 
CCCGGCGGCC GCACGCTGCA CGAGAGCCTC GTGCAGGCGC TGGCGGACGA AGGCGTGGCC 
AGCGCATCGA TGACGCTGAT CGGCGGCGAG CTGGCCGAGC TCGGCTTCTG CCTTGCGTTG 
CCCGATCCCA CGGGCCGCGT GCTCGCCACC TACGGCGCGC CGCACACGGT GCAGGGCGCC 
TGCTTCATCT TCGGCAACGC GACGCTCGGC AGCTCCGCCG GCGGCACGCC GGTGGTCCAT 
TGCCACGGCG CCTTCCGCAC CGCCGACGGC GCGGTGCGCG GCGGCCACAT CCTGACCGAC 
CGCACGGTGG TCGGACGGCG CAGCGTCACC GCCGTGGTCA CCGCGCTCGA CAGCTTCGAA 
CTGCGCGTGG TCTACGACGA CGAAACCCGC ATGCCGCTGA TGCGGCCCCA GGCCAGGCGC 
ATCCATGGCT GA 

 

Protein sequence

MVEKLMGLPR SRTVVHPGPF RPVRIDRMRD QKGRHFRLAL PGGRTLHESL VQALADEGVA 
SASMTLIGGE LAELGFCLAL PDPTGRVLAT YGAPHTVQGA CFIFGNATLG SSAGGTPVVH 
CHGAFRTADG AVRGGHILTD RTVVGRRSVT AVVTALDSFE LRVVYDDETR MPLMRPQARR 
IHG