| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5669 |
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| Symbol | |
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| ID | 7975722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 376367 |
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| End bp | 377956 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796252 |
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| Product | acyl-CoA synthetase |
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| Protein accession | YP_002947526 |
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| Protein GI | 239820341 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAGG CGCGGGCGAT GAACCTGTCC GCGCTGCTGT CGCAGACGGC CGCGCTCTTT
CCCGAGCGGC CGGGGCTGAT CCAGGGCGAG CGGCAGTGGA CCTGGCGCGA GATCGATGCG
CGCGTCGATG CGCTGGTGCA GGCGCTGCGC GCGCTCGGCA TGCGGCCGGG CGACAAGCTG
CTCGTGATGT CGCGCAACAA CCCGGCGCTG TTCGAGAGTT GCTGGGCCGC CTTCCGCCTG
GGCGCGGTGT GGGTGCCCGT CAACTTCCGG CTCACGCCGC CGGAGGTCGC CTACCTGGGC
AGCGCCAGCG AAGCCAGCGT GATGCTGGCC GAGGACTGCT TTGCCGAGCA TGTGGAGGCG
GTGAAGGCCG CGTCGTCGCA TCTGCGCTCG GTCGTCACCA TCGGTCTTCC GCGCGCGGAT
GAACTCGGCT ACGAGGCGCT GCTCGCGGCC AATGCCGGTG CGCCCGCGGC GATGGTGCAG
GTCGATGCCG ACCAGCCGCT GTGGTACTTC TACACCTCGG GCACCACCGG CCGCCCGAAG
GCCGCCGTGC TCACGCACGG GCAGATGGCC TTCGTCGTGG CCAACCACCT GGCCGACCTG
ATTCCGGGCA CCACCGAGCA CGACTGCTCG ATCGCCGTCG CGCCGCTGTC GCATGGCGCG
GGCATCCACG CGCTGCTCAA CGTGGCCCGT GGCGCCGCCA CCGTGCTGCT CGCGTCCGAC
AGGCTGGAGC CGGCCACCTT CTGGGCGCTG GTGGAGCGGC ACCGCGTGAC CAACGTCTTC
ACGGTGCCGA CCATCGTCAA GATGCTGGTG GAAGACCCGG CCGTCGACCG CTTCGACCAC
GGCTCCCTGC GCTACGTGGT CTATGCGGGC GCGCCGATGT ACCGCACGGA CCAGAAGCGC
GCGCTGCAAA AACTCGGCAA GGTGCTGGTG CAGTACTTCG GCCTCGGCGA AGTCACGGGC
TGCATCACGG TGCTGCCGCC GGCCATGCAT GCCGCCGACG ACGACGATCC GAACGCGAAC
ATCGGCTGCT GCGGCCGGGC CCGCACCGGC ATGGAGGTGG CCATCCTCGA CGCGTGGATG
CAGCCGGTGC CCGCCGGCAC CGTGGGCGAG ATCTGCTGCC GCGGACCGGC CGTGTTCGCG
GGCTACTTCA ACAACCCCGA AGCCACCGAG AAAGCGCTGC GCGGCGGCTG GTTCCACACC
GGCGATCTCG GCCGCATGGA TGCGCGCGGG CTGCTCTACA TCACGGGCCG CGAATCGGAC
ATGTACATCT CGGGCGGCTC CAACGTGTAC CCGCGCGAGG TCGAAGAAAT CTTGCTGATG
CATCCCGCCG TGCGCGAGGC GGCGGTGCTC GGCATCGCGG ACGAGAAATG GGGCGAGGTG
GGCGTGGCGG TGATCGTCGC TTCGCAACCC GGCCTCACGG CCGAGCAGCT GCTGCAGCAC
CTGGACGGCC GCTGCGCGAA GTACCGCTGG CCGCGGCACA TCTTCTTCTG GGATGCACTG
CCCAAGTCGG GCTACGGCAA GGTCGCCAAG GCCGACATCC GCAAGCAGTT GCTCGAACGC
GGCGACGTGA AGGAGGCCGC CACCACCTGA
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| Protein sequence | MSQARAMNLS ALLSQTAALF PERPGLIQGE RQWTWREIDA RVDALVQALR ALGMRPGDKL
LVMSRNNPAL FESCWAAFRL GAVWVPVNFR LTPPEVAYLG SASEASVMLA EDCFAEHVEA
VKAASSHLRS VVTIGLPRAD ELGYEALLAA NAGAPAAMVQ VDADQPLWYF YTSGTTGRPK
AAVLTHGQMA FVVANHLADL IPGTTEHDCS IAVAPLSHGA GIHALLNVAR GAATVLLASD
RLEPATFWAL VERHRVTNVF TVPTIVKMLV EDPAVDRFDH GSLRYVVYAG APMYRTDQKR
ALQKLGKVLV QYFGLGEVTG CITVLPPAMH AADDDDPNAN IGCCGRARTG MEVAILDAWM
QPVPAGTVGE ICCRGPAVFA GYFNNPEATE KALRGGWFHT GDLGRMDARG LLYITGRESD
MYISGGSNVY PREVEEILLM HPAVREAAVL GIADEKWGEV GVAVIVASQP GLTAEQLLQH
LDGRCAKYRW PRHIFFWDAL PKSGYGKVAK ADIRKQLLER GDVKEAATT
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