| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5653 |
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| Symbol | |
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| ID | 7975265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 359095 |
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| End bp | 359901 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644796237 |
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| Product | citrate synthase |
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| Protein accession | YP_002947511 |
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| Protein GI | 239820326 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0372] Citrate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0675936 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATCG GAAAGTCCAC CGTCCCGCGC ACCGCCATCT GCACCTCGGA CGAACACACC
ATCGTCGTGC GCGGCCAGGA CCTGTGCCGG GAGCTGATCG GGCACCTGTC GTTCACAGAT
TATTTCTTCC TGCTGCTCAC CGGGCGCCGC CCCGATGCCG CGTGCAGCAC GGTGCTCGAC
GCCACGCTGG TGGCAATTGC CGAGCACGGC CTTGTGCCGA GCGTGCAGGC CAGCCGCATG
ACCTTCGCGG CCGCGCCCGA TGCGCTGCAG GGCGCGGTGG CGGCCGGCAT CCTCGGCTGC
GGCTCCGTCA TCCTCGGCGC GTCCGAAACC GCGGGCCGGC TGTTCATCGA GGTGGCGGCG
CGCGTGGATG CGGGCGCCAC GCTGCCGCAG GCCGCCGCCG CGGCCATCGC CGAACTCAAG
GCCGCGCGCG CCGCGATCCC CGGTTACGGC CATCCGCTGC ACAAGGAACG CGATCCGCGC
GTCGACCGGC TGATCGACGT GGCGACGCAG GCCGGCGCCG ACCTGCGCTA TGTGCGCATC
GCGCAGGCGC TGGAAGAGGC GATCCCGGCC ATCGTCGGCA AGGACCTGCG CATGAACGTC
TCGGCGGCGA TTCCGGCGGT GCTGCTGGGC GTGGGCTTTC CGGTGGCGTC GCTGCGCGGC
GTGCCGATCC TCGCGCGCAC CGCGGGGCTG ATCGCACACC TCGCGGAAGA GGCCGAGATG
CCGAGCGGCT TTGCGCTGTC CTACCAGGCC ACGCGCGAGC TGCAGTACGA AGGCACCGTG
CCCGCGGGCT TCGGGGAGGC GCGGTGA
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| Protein sequence | MKIGKSTVPR TAICTSDEHT IVVRGQDLCR ELIGHLSFTD YFFLLLTGRR PDAACSTVLD
ATLVAIAEHG LVPSVQASRM TFAAAPDALQ GAVAAGILGC GSVILGASET AGRLFIEVAA
RVDAGATLPQ AAAAAIAELK AARAAIPGYG HPLHKERDPR VDRLIDVATQ AGADLRYVRI
AQALEEAIPA IVGKDLRMNV SAAIPAVLLG VGFPVASLRG VPILARTAGL IAHLAEEAEM
PSGFALSYQA TRELQYEGTV PAGFGEAR
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