| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5633 |
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| Symbol | |
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| ID | 7975245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 338397 |
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| End bp | 339689 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644796217 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_002947491 |
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| Protein GI | 239820306 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTCG ACTCCTACTG GACCGATTCC GCGCCGGCCT TCGTTCCCGC AGTGCATGCA
CTGCCGGCGC AGGTCGACGT TGCGATCGTC GGCGGCGGCT TCACCGGCCT GTCGGCGGCG
CTGGCGCTGG CCAGGCGCGG TGCCCGCGTC GCGGTGCTGG AGGCCGGCAG CCGCGTGGCG
GCCGAGGCGT CGGGGCGCAA CGGCGGGCAC GTGAACAACG GGCTCGCGGT GGACTATGCC
GATGTGGCCG CCAAGGTCGG CACCGACAAG GCCCGCGCCT GGTACCGCGC CTACGACGAC
GCGGTCGACA CCGTGGCGCG GCTGGTGCGC GACGAGGCGA TCGACTGCGA CTTCATGCGC
CACGGCAAGC TCAAGCTCGC CACGCGCGCC AACCAGATGG CCGCGCTCGA ACGCAGCGCC
GAGCGCCTGG TCGGCGACGG CGTGGACACC GACGTCGAAA TCCTCAATGC GGCCCAGGTG
CGCAGCGAGG TGCAGAGCGA GCGCTTCCAC GGCGGCCTGC TCTACAAGCG CAGCGGCCAG
ATGCACATGG GCCGCTTCGC CCACGGCCTG GCCGAGGCCG CAGAGCGCCA TGGCGCGCAG
ATCCACACCG GCACGGCCGT GAATCGCATC GAGCGCCTGG GCCAGGGCCA CGCGCACCGG
CTGCACACCG CCGGCGGCAT CGTCACTGCG CAGCAGGTGC TGCTGGCCAC CGGTGCCACG
CGCCACGGCG GCTACGGCAG CTTCGGCTGG CTGCGCCGGC GCATCGTGCC GATCGGCAGC
TTCATCGTCG TGACAGAGCC GCTCGGCGCC GAACGCGCGC AGGCGCTGCT CGCGGCGCGG
CGCACCTACA CGACGGTGGC CAACATCCAC CATTACTTCC GGCTCACGGC CGACCACCGG
CTGGTGTTCG GCGGCCGCGC GCGCTTCTCG GTCTCCAGCC CGCAGGCCGA TGCCGCGAGC
GGCGAGATCC TGCGCGCCGG GCTCGCTGAA ACCTTTCCGC AGCTCGGCGC CGTGCGGCTC
GACTATTGCT GGGGCGGACT GGTCGACATG ACGCAGGACC GCCTCCCCCA CGCCGGCGAG
CGCGACGGCC TCTACTACGC GATGGGCTAC AGCGGCCACG GCACGCAGAT GTCGGTCCAC
ATGGGCGAAC GCATGGCCGC CGTGATGGAG GGCAACGCCG CCGCCAACCC CTGGCAGGAC
CGCGGCTGGC CCGCCATTCC CGGCCACTTC GGCCCGCCCT GGTTCCTGCC TGCGATGGGC
CTCTACTACT CGCTCAAGGA CAAGCTGGCC TGA
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| Protein sequence | MKLDSYWTDS APAFVPAVHA LPAQVDVAIV GGGFTGLSAA LALARRGARV AVLEAGSRVA
AEASGRNGGH VNNGLAVDYA DVAAKVGTDK ARAWYRAYDD AVDTVARLVR DEAIDCDFMR
HGKLKLATRA NQMAALERSA ERLVGDGVDT DVEILNAAQV RSEVQSERFH GGLLYKRSGQ
MHMGRFAHGL AEAAERHGAQ IHTGTAVNRI ERLGQGHAHR LHTAGGIVTA QQVLLATGAT
RHGGYGSFGW LRRRIVPIGS FIVVTEPLGA ERAQALLAAR RTYTTVANIH HYFRLTADHR
LVFGGRARFS VSSPQADAAS GEILRAGLAE TFPQLGAVRL DYCWGGLVDM TQDRLPHAGE
RDGLYYAMGY SGHGTQMSVH MGERMAAVME GNAAANPWQD RGWPAIPGHF GPPWFLPAMG
LYYSLKDKLA
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