Gene Vapar_5620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_5620 
Symbol 
ID7975232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand
Start bp325551 
End bp325871 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content58% 
IMG OID644796204 
Productplasmid stabilization system 
Protein accessionYP_002947478 
Protein GI239820293 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACGGTG AATTCCAGGT CAGATATACC GATGCAGCCC GTGAAGACCT GATCCGGCTT 
TTCGACTTCC TGCTCGTGCG TGCAAGAACG CGCGAGGATT TCGACGCGGC GCAGCGCACC
ATCGACACTC TCGCCACGGC GATCGAGAGC CACTTAAGCC GAACACCATT CATCTTCCGC
AAAGCGAGTG ACAGCCCGTT CTTGCGAGAA CTCGTGATTC CCTGCGGCGG GGCCGGCTAC
GTCGCACTTT ACGAGATTGA AGGTGCTGAG ACCGTCAACA TCCTGGCGCT TCGGCATCAG
CGTGAAGACG ACTACCACTG A
 
Protein sequence
MNGEFQVRYT DAAREDLIRL FDFLLVRART REDFDAAQRT IDTLATAIES HLSRTPFIFR 
KASDSPFLRE LVIPCGGAGY VALYEIEGAE TVNILALRHQ REDDYH