| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5603 |
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| Symbol | |
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| ID | 7975215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 308563 |
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| End bp | 309393 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644796187 |
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| Product | extracellular solute-binding protein family 3 |
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| Protein accession | YP_002947461 |
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| Protein GI | 239820276 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTGC TCCCCGCTCT CGCTTCGGTC GCTGCTCTTT TCATTCTCGG GATCGGGGGC
GCGAACGCCC AGGCCTGCAA GTCGCCCGTG CCTGATGCCG CGCTGGTGAA GAAGGGCACG
CTGACGATGT CGATCAACCC GACCCTGCCG CCGATGCAGT TCGTGGACCA GACCGGTGCG
CTCAAGGGCA TGCGGGTCGA ACTGGGCGAG GCCATTGCCA AGCGGCTGTG CCTCACGCCC
GAGTACGTGC GCATCGAGTT CTTGGCCATG ATCCCGGGCC TGCAGGCCGG CCGCTGGGAC
GTCATCAACA CCGGCATCTT CTACACCGAC GAGCGCGCCA GGCTCATGCA GATGCTGCCC
TACGAAGACC AGGCCATCAG CATCAGCACC GCCAAGGGCA ATCCGCTGAA GATCGGCAAG
CCCGAGGACC TGTCGGGCAA GAGCATCGGC GTGGAGATCG GCGGCTTCGA GGAGCGCAAG
GCGCGCGAGC TCGACAAGCA GCTGACCGAC AAGGGCCTGA AGGGCATGAC CATCCGCACC
TTCGAGAACT TCGCGATGGC GTTCCAGGCG CTGCGCGCCG GCCAGGTCGA GGTGGCCCTG
TCGATCGACT CCACCGGTGC CGAGTACCAG AAGCGCGGCG ACTTCGACCG CGTGCTGCAA
GGCCTGTTCC CGACGCCGGT CGCGCTGGCC GCGAAGAACA AGGAACTGTC CCTTGCGGTG
GCCAAGGTGC TCAACGACAT GAAGGCCGAC GGCTCCTTCA ACAAGCTGCT CGACCAGTAC
GGCGTCAAGG CGACCGACGG CGCCGTGGTC GTCAAGGGAC CGGCGAGCTG A
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| Protein sequence | MKLLPALASV AALFILGIGG ANAQACKSPV PDAALVKKGT LTMSINPTLP PMQFVDQTGA
LKGMRVELGE AIAKRLCLTP EYVRIEFLAM IPGLQAGRWD VINTGIFYTD ERARLMQMLP
YEDQAISIST AKGNPLKIGK PEDLSGKSIG VEIGGFEERK ARELDKQLTD KGLKGMTIRT
FENFAMAFQA LRAGQVEVAL SIDSTGAEYQ KRGDFDRVLQ GLFPTPVALA AKNKELSLAV
AKVLNDMKAD GSFNKLLDQY GVKATDGAVV VKGPAS
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