Gene Vapar_5571 details

Gene Information

• Locus tag: Vapar_5571
• ID: 7975428
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012792
• Strand: +
• Start bp: 278595
• End bp: 279179
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 644796155
• Product: phosphoesterase PA-phosphatase related
• Protein accession: YP_002947429
• Protein GI: 239820244

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0212028
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGCGC TCAATTTCAC GGCGTTCCAA TGGATCGCTG CCGGCACCCA GCCCACCCCG 
TGGGTCCTTG GCCTTGCAAC CGCCCTCGCG CTCTGGGGCA GCTGGCTCTG CGGGGCTGTC 
GTGGTGGCGG CCCTGTGGCG CCATCGCGCC GAGCGCGCCT ACCTGTGCAT CGTCGCGGCG 
CTCGCAGGCG CGACATCGGC GATGGCGCAT GCCATCGCAC TGTCTCTGGA CATGCCCCGG 
CCCTTCGTGC TGGCGCTGTC ACCGGCCTAC ATCGAACACG GGGGACGCGG CAGCCTTCCC 
AGCACGCACG CGGCCGTCAT GTTCATGGTG GCGCTGGCCT TCCTGCTGCG CCCCCGCCTG 
CGCGCGCTTG GCGTGCCGCT GCTTGCGCTG GCGGCCGCCA CCGGGTGGGC ACGCATCTAC 
GTGGGCGTCC ATTTCCCGCT CGACATCATC GCGGGCCTGT TGCTGGCCGG TGTGATCGCC 
GCGGCGCTGG CCCTCGTGCA ATGGTGCGTG CATCTTGCCC TGCCACGAAC CGGCGGCGCA 
TCCGGCGGCA AGGACGCGGC CGGTTCGCTG TGGAGGCCTT CATGA 

 

Protein sequence

MNALNFTAFQ WIAAGTQPTP WVLGLATALA LWGSWLCGAV VVAALWRHRA ERAYLCIVAA 
LAGATSAMAH AIALSLDMPR PFVLALSPAY IEHGGRGSLP STHAAVMFMV ALAFLLRPRL 
RALGVPLLAL AAATGWARIY VGVHFPLDII AGLLLAGVIA AALALVQWCV HLALPRTGGA 
SGGKDAAGSL WRPS