| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5545 |
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| Symbol | |
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| ID | 7975402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 248720 |
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| End bp | 250321 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644796130 |
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| Product | L-lactate transport |
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| Protein accession | YP_002947404 |
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| Protein GI | 239820219 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1620] L-lactate permease |
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| TIGRFAM ID | [TIGR00795] L-lactate transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.892613 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTATCAAC AGATCTACGA CCCGATCGGC GGGTCCCTGC TGCTGTCGTC GGCGCTGGCC
GCGCTGCCGC TGCTCACCAT GTTCGTCATG CTGGGATGGC TGCGCGTTGC GCCGCACATC
GCGGCCTTCG TGTCGCTCGC CATCTGCGTT CTGGTGGCGG TGTTCGCCTA CCGCATGCCG
TGGGCCACGG CGCTCGACGT GGGGCTGTAC GGCGCGGCCT TCAGCGTGCT GACGGTGCTG
TGGATCATCG TCAACGCGAT CTGGCTCTAC AACCTGACCG TGCAGTCGGG CCACTTCGCG
GTGCTCAAGG ACAGCTTCGC GCGCATCAGC CCCGATCCGC GCATCCAGTC GATCATCATC
GCCTACAACT TCGGCGCGCT GATCGAGGCC CTGGCCGGCT CCGGAACGCC GATTGCCATC
TCGGGCGCCA TGCTGCTGGC CATCGGCATC AAGCCGATGA AGGCCGCCGT GCTGGCGCTG
GTGGCCAACA CGGCGCCCGT CGCCTTCGGC GCACTTGCGG TGCCGATCGT CACGCTGGCG
CAGGTGTCGG GCGAACCCTT TGGCCTGCTG GGTGCGATCG TCGGGCGCCA GACGCCGATC
CTGGCGGCCT TCGTGCCGCT GATCCTCGTC GGCCTGCTCG ACGGCAGGCG CGGCCTTCGC
CAGACCTGGC CGGCCGCCGT GGTCGCAGGC CTTGCGTTCG GCGCGGCGCA GTGGATTGCC
GCCAACCACA TCTCGGTCGA GCTGGCCGAT GTATTCGGCG CCCTCGGCTC GGCCGGCGCG
CTCATGCTGT TCCTGCGCGT GTGGCAGCCG GTGCAGCCCG GGCGCATCGA AGACGTGGAG
CCGTCGCAGC TGGCGGCGGC GCGGCACGAC GCACGCACCG TATGGATCGC CTACGCACCC
TACATGCTGA TCATTGCCAT CTTCTCGCTG GCGCAGATCA AGGGCGTGCA GCAATGGCTC
TCGGCCGGCA CCCTGCGTTT CCCGTGGCCG GGGGTGGACA TCGTCAATGC GGCGGGCAAG
CCCGTGTCCT CGGTCTTCAC GCTCAATGCG CTGTCGGCGA CCGGCACGCT TCTTTTCGTG
GCAGGGCTGC TGTCGGCGAT GCTGCTGCGC GTGCGGCCCA GCGCGGCCGT GCGCACCTAT
GGCGCCACGC TCAGGCAGCT GCGCTGGGCC ATTCCCACCG TGCTGTGCGT GCTGGCCCTG
GCCTTTGTGA TGAACTACTC CGGCCAGACG ATCACGCTCG GCCGCTGGAT GGCGCAGACC
GGCCCGGCCT TCGCCTTTCT CTCGCCGGTG ATCGGCTGGA TCGGCGTGGC CGTGACCGGG
TCGGACAATT CCTCCAACGC GCTGTTCGGC GCGCTGCAGG TCGCCGCGGC CAACGAGACC
GGCATCCGCC CCGCATTGCT GGCCGCGGCC AACGCATCCG GCGGCGTGCT CGGCAAGATG
ATCTCGCCGC AGAGCCTGGC CGTCGGCGCG GCCGCGGTCG GCGTCATCGG GCAGGAGGGC
GCGATCTTCC GCAAGGTGAT CGGCTGGAGC CTCCTGTTGC TGCTGGCGCT TTCCACGCTG
GTCTACTTGC AGACGGGGCC GCTGGCCTGG ATGCTTCCCT GA
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| Protein sequence | MYQQIYDPIG GSLLLSSALA ALPLLTMFVM LGWLRVAPHI AAFVSLAICV LVAVFAYRMP
WATALDVGLY GAAFSVLTVL WIIVNAIWLY NLTVQSGHFA VLKDSFARIS PDPRIQSIII
AYNFGALIEA LAGSGTPIAI SGAMLLAIGI KPMKAAVLAL VANTAPVAFG ALAVPIVTLA
QVSGEPFGLL GAIVGRQTPI LAAFVPLILV GLLDGRRGLR QTWPAAVVAG LAFGAAQWIA
ANHISVELAD VFGALGSAGA LMLFLRVWQP VQPGRIEDVE PSQLAAARHD ARTVWIAYAP
YMLIIAIFSL AQIKGVQQWL SAGTLRFPWP GVDIVNAAGK PVSSVFTLNA LSATGTLLFV
AGLLSAMLLR VRPSAAVRTY GATLRQLRWA IPTVLCVLAL AFVMNYSGQT ITLGRWMAQT
GPAFAFLSPV IGWIGVAVTG SDNSSNALFG ALQVAAANET GIRPALLAAA NASGGVLGKM
ISPQSLAVGA AAVGVIGQEG AIFRKVIGWS LLLLLALSTL VYLQTGPLAW MLP
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