| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5522 |
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| Symbol | |
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| ID | 7975379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 222334 |
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| End bp | 222660 |
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| Gene Length | 327 bp |
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| Protein Length | 108 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644796108 |
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| Product | putative CcdB cytotoxin-like protein |
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| Protein accession | YP_002947382 |
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| Protein GI | 239820197 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0819956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGCAAT TCGACGTTCA TCGCAACAAA GGGAGCCAAA AGGAAAGCAT TCCCTTTGTG
GTGGTCATCC AGTCTGCGCG ATTCGATGCC TATCGCCGCA GAGTGGTTGT TCCCTTGGTC
TTGCGCCAGC ACGCCCCTGG CTCATCGGTT TCCGGCTCCC GGATGAATCC CATCTTCCGC
GTGGGTGGTG TCGAAGTCGT CCTCAATCCA TTGCAGGTGG TATCCGTGGC AACCGATCAA
CTCGGTGCCG TGGTCGACTC TCTTGCGGAG CATGGGCAAC AGATCATTGA TGCGATGGAC
GAGTTGATGA CCCGAGCCTG GGGATAG
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| Protein sequence | MAQFDVHRNK GSQKESIPFV VVIQSARFDA YRRRVVVPLV LRQHAPGSSV SGSRMNPIFR
VGGVEVVLNP LQVVSVATDQ LGAVVDSLAE HGQQIIDAMD ELMTRAWG
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