| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5521 |
|---|
| Symbol | |
|---|
| ID | 7975378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012792 |
|---|
| Strand | + |
|---|
| Start bp | 222066 |
|---|
| End bp | 222329 |
|---|
| Gene Length | 264 bp |
|---|
| Protein Length | 87 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644796107 |
|---|
| Product | prevent-host-death family protein |
|---|
| Protein accession | YP_002947381 |
|---|
| Protein GI | 239820196 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01552] prevent-host-death family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.133668 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTACCG TCACCTCTGT CGAGGCACAA AACAAGTTTG GGCAGCTCCT GGACACAGCG
CAACGCGAGC CAGTCATCAT CACGCGTCAC GGGCGCCCCG CGGCCTACAT GATCTCGCCT
CAAGAGATGA AAGAGTTTCA GGAGGCGCGT GCACGCAGCG GCCAAGGCAA ATCTGCGCGC
GACTGGGCCA CGGCAAGCGC ACAGGCCTGG AATGAGTTCG ACACCAGGTT CGGTTCGTTC
GCGGACGAGC ACTCGACGCT CTGA
|
|---|
| Protein sequence | MITVTSVEAQ NKFGQLLDTA QREPVIITRH GRPAAYMISP QEMKEFQEAR ARSGQGKSAR
DWATASAQAW NEFDTRFGSF ADEHSTL
|
|---|
| |