| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5520 |
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| Symbol | |
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| ID | 7975377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 221539 |
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| End bp | 221874 |
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| Gene Length | 336 bp |
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| Protein Length | 111 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644796106 |
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| Product | Cupin 2 conserved barrel domain protein |
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| Protein accession | YP_002947380 |
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| Protein GI | 239820195 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0403366 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACTCA CGCACGCATC CTCTGGCCAG GTCGTGAACC TCGGCGCACT CGACGGGCAG
GCGACCGAAA CCTGCGCACT GCTGAAGGCC CGCGACATCG AGCTCATGTG GCTGGTGCTG
CCGGCCGGCA AGCGGGTTCC GTCGCATGCG GTCTCGACCT CGATGACCTT GCAGTGCATG
CGCGGCAAGG TCGAGGTGCA GCTGGACGGC GACGTGAAGC TGCTCGAGGC CGATCAGGTC
ATGTACCTGG CGGGCGGCGT GCCGCACGGC CTGCATGCGC TGGAAGATGC CAGGCTGCTG
ATGACCGTCG TGCTGCCGGC CAGCCGCACC GACTGA
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| Protein sequence | MALTHASSGQ VVNLGALDGQ ATETCALLKA RDIELMWLVL PAGKRVPSHA VSTSMTLQCM
RGKVEVQLDG DVKLLEADQV MYLAGGVPHG LHALEDARLL MTVVLPASRT D
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