| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5503 |
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| Symbol | |
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| ID | 7975360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 206359 |
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| End bp | 207267 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644796090 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002947364 |
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| Protein GI | 239820179 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGCCC TCGATTCGCT GCGTATCTTC GTGGCCACCC AGAAGAAGGG CAGCCTCTCG
GCGGCGGCCC GCAGCCTCAG CCTATCGCCG GCCACCATCT CGCGGCGCAT CAGCGCGCTG
GAGGAAGAAC TGGGCGTGCA GCTGGTGGAC CGCACCAGCC GCAACCTCAA GGTGACCGAG
GCGGGCCAGG CCTTCCTGGA GCGGGCCGAG GCGGTGCTGG AACTCATGAG CGAGGCCGAG
CAGGTCGTGC ACAACGCGCG CCAGCGCCCC GAGGGCCGGC TGCGCGTGCA TTCGCGCACC
CACATCGGCC TGCGCGTGCT GGCGCCGCTG CTGCCGCGCT TTGCGGAGCT GTATCCGGAC
ATCCGCGTCG AGCTCGAGCT CTCCGAGCAT CCGGTCAACC TGGTGGAGCA CGACTTCGAC
GTCGACATCC GCACCGGCGA ATCCACCGAC TCGGGCTTCG TCATCAAGCG GCTGCTGTCG
AGCGACGAGG TGCTGGTGGC CAGCCCGGCC TTCGTGAAGA CCTATTCGCG CATCCGGCAT
CCGAACGACC TGCCCCAGGT GCGCTGCCTC ACCTACCGGC GCGAGCGCGA GGTCATCACC
TGGAAGTACA TCGACGAGGC GGGCGAGCAG CAGGAGCTGG TGATCCAGGG CGTGCTGAGC
GCCAACAACG GCGAACTGCT GAGGCTGGCC GCGATCGGCG GCATGGGCGT GGCACTGCTG
TCGGAAGCCA CCGTGCGCAG CGACCTGCAG GCCGGCACGC TGGTGCGGTT ACTGCCCGAC
TACCGCTTCG CAGTGCGGGC TTTTTCCAAC GGCGTCTTCG CCGTGTTCCG GCAAAGCCGC
GTGCTGCCGC TGAAGGTGCG TGCCTTCGTC GACTACGTGG CTGATGCGCT TCGAAGCGAG
AAGCGCTAA
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| Protein sequence | MKALDSLRIF VATQKKGSLS AAARSLSLSP ATISRRISAL EEELGVQLVD RTSRNLKVTE
AGQAFLERAE AVLELMSEAE QVVHNARQRP EGRLRVHSRT HIGLRVLAPL LPRFAELYPD
IRVELELSEH PVNLVEHDFD VDIRTGESTD SGFVIKRLLS SDEVLVASPA FVKTYSRIRH
PNDLPQVRCL TYRREREVIT WKYIDEAGEQ QELVIQGVLS ANNGELLRLA AIGGMGVALL
SEATVRSDLQ AGTLVRLLPD YRFAVRAFSN GVFAVFRQSR VLPLKVRAFV DYVADALRSE
KR
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